RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 PIP4P1Q86T03 277 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 C21orf62Q9NYP8 219 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 ONECUT1Q9UBC0 465 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 CRLF1O75462 422 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 SUMO2P61956 95 aaKnown RBP12.41□□□□□ -0.42
CHD1L-203ENST00000369259 FAM27E3Q08E93 113 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 Q6Q795 121 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 C2orf66Q6UXQ4 117 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 C9JAW5 83 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
CHD1L-203ENST00000369259 COX7A1P24310 79 aa12.4□□□□□ -0.42
CHD1L-203ENST00000369259 IGHV3-23P01764 117 aa12.4□□□□□ -0.43
CHD1L-203ENST00000369259 RNF182Q8N6D2 247 aa12.4□□□□□ -0.43
CHD1L-203ENST00000369259 NBR2O15453 112 aa12.39□□□□□ -0.43
CHD1L-203ENST00000369259 AGPAT4-IT1Q9H0P7 198 aa12.39□□□□□ -0.43
CHD1L-203ENST00000369259 CENPVL3A0A0U1RRI6 287 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 ZNF883P0CG24 379 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 HERVK_113P61574 105 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 TIMM23O14925 209 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
CHD1L-203ENST00000369259 IGFL2Q6UWQ7 119 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 Q6ZS46 218 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 CFAP47Q6ZTR5 3102 aa12.38□□□□□ -0.43
CHD1L-203ENST00000369259 LY6LH3BQJ8 138 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 SCGB2A1O75556 95 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 CTSGP08311 255 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
CHD1L-203ENST00000369259 Q8N1Y9 231 aa12.37□□□□□ -0.43
CHD1L-203ENST00000369259 ZFHX4Q86UP3 3567 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 CRYGDP07320 174 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 PAPPA-AS1Q5QFB9 102 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
CHD1L-203ENST00000369259 IGFBPL1Q8WX77 278 aa12.36□□□□□ -0.43
CHD1L-203ENST00000369259 IGLV4-69A0A075B6H9 119 aa12.35□□□□□ -0.43
CHD1L-203ENST00000369259 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
CHD1L-203ENST00000369259 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
CHD1L-203ENST00000369259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.35□□□□□ -0.43
CHD1L-203ENST00000369259 NPBQ8NG41 125 aa12.35□□□□□ -0.43
CHD1L-203ENST00000369259 Q6ZQT7 251 aa12.34□□□□□ -0.43
CHD1L-203ENST00000369259 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
CHD1L-203ENST00000369259 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
CHD1L-203ENST00000369259 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
CHD1L-203ENST00000369259 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.43
CHD1L-203ENST00000369259 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 P0DMU3 169 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 PRR30Q53SZ7 412 aaPredicted RBP12.33□□□□□ -0.44
CHD1L-203ENST00000369259 C15orf53Q8NAA6 179 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 IGHV3-35A0A0C4DH35 117 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
CHD1L-203ENST00000369259 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
CHD1L-203ENST00000369259 BUB3O43684 328 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
CHD1L-203ENST00000369259 EMP1P54849 157 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 OR10J6PQ8NGY7 276 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 A4D1N5 150 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 TNFRSF18Q9Y5U5 241 aa12.32□□□□□ -0.44
CHD1L-203ENST00000369259 ROS1P08922 2347 aa12.31□□□□□ -0.44
CHD1L-203ENST00000369259 M0R381 172 aa12.31□□□□□ -0.44
CHD1L-203ENST00000369259 TSHBP01222 138 aa12.31□□□□□ -0.44
CHD1L-203ENST00000369259 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
CHD1L-203ENST00000369259 ATXN8Q156A1 80 aa12.31□□□□□ -0.44
CHD1L-203ENST00000369259 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
CHD1L-203ENST00000369259 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
CHD1L-203ENST00000369259 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 AMELXQ99217 191 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 HIF1ANQ9NWT6 349 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
CHD1L-203ENST00000369259 SPENQ96T58 3664 aaKnown RBP12.3□□□□□ -0.44
CHD1L-203ENST00000369259 IGHV1-69DA0A0B4J2H0 117 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 TEX49A0A1B0GTD5 131 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
CHD1L-203ENST00000369259 NDPQ00604 133 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 PMVKQ15126 192 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 C14orf178Q8N769 122 aaPredicted RBP12.3□□□□□ -0.44
CHD1L-203ENST00000369259 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 ZZEF1O43149 2961 aa12.3□□□□□ -0.44
CHD1L-203ENST00000369259 BRI3O95415 125 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 C1orf210Q8IVY1 113 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 DYNLRB1Q9NP97 96 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 ZGRF1Q86YA3 2104 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 A0A0B4J2C4 111 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 H7C2G1 150 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 MGPP08493 103 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms