RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SNAI2O43623 268 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 TCF21O43680 179 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 LY6G6DO95868 133 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 MAP1LC3AQ9H492 121 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 HSBP1L1C9JCN9 74 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 MED14OSP0DP75 135 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 APRG1Q8IVJ8 170 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
USF1-202ENST00000368020 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
USF1-202ENST00000368020 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
USF1-202ENST00000368020 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
USF1-202ENST00000368020 TM4SF20Q53R12 229 aa10.62□□□□□ -0.71
USF1-202ENST00000368020 PRR31Q5SQ13 230 aa10.62□□□□□ -0.71
USF1-202ENST00000368020 OR8A1Q8NGG7 326 aa10.62□□□□□ -0.71
USF1-202ENST00000368020 NSD1Q96L73 2696 aaPredicted RBP10.61□□□□□ -0.71
USF1-202ENST00000368020 LGALS9O00182 355 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
USF1-202ENST00000368020 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 SMR3AQ99954 134 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 HBDP02042 147 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
USF1-202ENST00000368020 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 RNF185Q96GF1 192 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
USF1-202ENST00000368020 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 SVEP1Q4LDE5 3571 aa10.6□□□□□ -0.71
USF1-202ENST00000368020 MUC21A0A0G2JKD1 596 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 MUC21A0A140T8X8 626 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 NPYP01303 97 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 ASIPP42127 132 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
USF1-202ENST00000368020 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 Q6ZN92 141 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 DEFB125Q8N687 156 aa10.59□□□□□ -0.71
USF1-202ENST00000368020 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 EREGO14944 169 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
USF1-202ENST00000368020 Q8N2B8 174 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 DCANP1Q8TF63 244 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 ZNF702PQ9H963 129 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
USF1-202ENST00000368020 PRSS47A8MTI9 375 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 TNFRSF6BO95407 300 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 ATOH7Q8N100 152 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
USF1-202ENST00000368020 HOXA3O43365 443 aaPredicted RBP10.57□□□□□ -0.72
USF1-202ENST00000368020 RPLP1P05386 114 aaKnown RBP10.57□□□□□ -0.72
USF1-202ENST00000368020 IGLL1P15814 213 aa10.57□□□□□ -0.72
USF1-202ENST00000368020 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
USF1-202ENST00000368020 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
USF1-202ENST00000368020 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
USF1-202ENST00000368020 DPF1Q92782 380 aa10.57□□□□□ -0.72
USF1-202ENST00000368020 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
USF1-202ENST00000368020 LEPP41159 167 aa10.56□□□□□ -0.72
USF1-202ENST00000368020 NUTF2P61970 127 aaKnown RBP10.56□□□□□ -0.72
USF1-202ENST00000368020 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
USF1-202ENST00000368020 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
USF1-202ENST00000368020 A0A1B0GV90 55 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 KLLNB2CW77 178 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 H3BVH4 76 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 SRD5A1P18405 259 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 PRR9Q5T870 116 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 A0A096LNJ9 63 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 NCR2O95944 276 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 PPP1R17O96001 155 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 EVI2AP22794 236 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 TSPOP30536 169 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
USF1-202ENST00000368020 Q8N8P6 123 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
USF1-202ENST00000368020 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 K7EMI3 77 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 FCER1GP30273 86 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 COL5A1-AS1Q5SY13 56 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
USF1-202ENST00000368020 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
USF1-202ENST00000368020 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
USF1-202ENST00000368020 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 AP1S3Q96PC3 154 aa10.53□□□□□ -0.72
USF1-202ENST00000368020 DPH3P1Q9H4G8 78 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms