RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C9orf66Q5T8R8 295 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 Q8N8P6 123 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 C18orf32Q8TCD1 76 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 FREM1Q5H8C1 2179 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 Q8N9W7 124 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 HLA-DRB4P13762 266 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 CLPSL2Q6UWE3 100 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 V9GYV3 84 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 HLA-DRB4X5D2U9 266 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 SRCAPQ6ZRS2 3230 aa14.55□□□□□ -0.08
CLIP2-202ENST00000361545 CGB3P0DN86 165 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 Q8N7P7 452 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 C19orf84I3L1E1 186 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 FBXL19-AS1Q494R0 122 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 SPRY2O43597 315 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 C5orf56Q8N8D9 126 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 MPV17L2Q567V2 206 aa14.54□□□□□ -0.08
CLIP2-202ENST00000361545 MRPL53Q96EL3 112 aaKnown RBP14.54□□□□□ -0.08
CLIP2-202ENST00000361545 ANGP03950 147 aaKnown RBP14.53□□□□□ -0.08
CLIP2-202ENST00000361545 PIFOQ8TCI5 191 aa14.53□□□□□ -0.08
CLIP2-202ENST00000361545 U3KQE9 123 aa14.53□□□□□ -0.08
CLIP2-202ENST00000361545 A8MWP6 167 aa14.53□□□□□ -0.08
CLIP2-202ENST00000361545 K7EIM0 57 aa14.53□□□□□ -0.08
CLIP2-202ENST00000361545 SLAQ13239 276 aa14.52□□□□□ -0.08
CLIP2-202ENST00000361545 GTSF1LQ9H1H1 148 aa14.52□□□□□ -0.09
CLIP2-202ENST00000361545 I3L2K1 104 aa14.52□□□□□ -0.09
CLIP2-202ENST00000361545 FAM231DQ6ZW35 169 aa14.52□□□□□ -0.09
CLIP2-202ENST00000361545 PMVKQ15126 192 aa14.52□□□□□ -0.09
CLIP2-202ENST00000361545 IGLV11-55A0A075B6I3 123 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 IGHV4OR15-8A0A075B7B6 117 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 A0A087WW49 117 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 SPAG8Q99932 426 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-202ENST00000361545 EML6Q6ZMW3 1958 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 NXPH4O95158 308 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 TMEM141Q96I45 108 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 F8WEM9 126 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 Q6ZSR3 168 aa14.51□□□□□ -0.09
CLIP2-202ENST00000361545 CTSGP08311 255 aa14.5□□□□□ -0.09
CLIP2-202ENST00000361545 RNASE13Q5GAN3 156 aaKnown RBP14.5□□□□□ -0.09
CLIP2-202ENST00000361545 MYO18BQ8IUG5 2567 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 NPYP01303 97 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 CFHR4Q92496 578 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 IGKV1-17P01599 117 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 PYGO2Q9BRQ0 406 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 SMIM27A0A1W2PRY6 76 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 Q0VG73 95 aa14.49□□□□□ -0.09
CLIP2-202ENST00000361545 MRPL52Q86TS9 123 aaKnown RBP14.49□□□□□ -0.09
CLIP2-202ENST00000361545 CCDC168Q8NDH2 2452 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 IL15RAQ13261 267 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 IGF2RP11717 2491 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 TNCP24821 2201 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 CGB7P0DN87 165 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 EP400Q96L91 3159 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 LTAP01374 205 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 IGLV1-47P01700 117 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 EGR2P11161 476 aaPredicted RBP14.48□□□□□ -0.09
CLIP2-202ENST00000361545 GAGE2BQ13066 116 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 GAGE2EQ4V326 116 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 GAGE2DQ9UEU5 116 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 WNK1Q9H4A3 2382 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 RHOHQ15669 191 aa14.48□□□□□ -0.09
CLIP2-202ENST00000361545 C11orf52Q96A22 123 aa14.47□□□□□ -0.09
CLIP2-202ENST00000361545 SNHG12Q9BXW3 62 aa14.47□□□□□ -0.09
CLIP2-202ENST00000361545 SMIM2Q9BVW6 85 aa14.47□□□□□ -0.09
CLIP2-202ENST00000361545 SIRPDQ9H106 197 aa14.47□□□□□ -0.09
CLIP2-202ENST00000361545 SIGLEC8Q9NYZ4 499 aa14.46□□□□□ -0.09
CLIP2-202ENST00000361545 TRAV8-3A0A0A6YYJ7 113 aa14.46□□□□□ -0.09
CLIP2-202ENST00000361545 TRAV8-4A0A0B4J246 113 aa14.46□□□□□ -0.09
CLIP2-202ENST00000361545 ZFAND6Q6FIF0 208 aa14.46□□□□□ -0.09
CLIP2-202ENST00000361545 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
CLIP2-202ENST00000361545 IGKV1OR2-108A0A075B7D4 117 aa14.46□□□□□ -0.1
CLIP2-202ENST00000361545 Q6ZQT7 251 aa14.45□□□□□ -0.1
CLIP2-202ENST00000361545 WIPF2Q8TF74 440 aaPredicted RBP14.45□□□□□ -0.1
CLIP2-202ENST00000361545 RMI2Q96E14 147 aa14.45□□□□□ -0.1
CLIP2-202ENST00000361545 Q9HAA7 133 aa14.45□□□□□ -0.1
CLIP2-202ENST00000361545 IGKV2D-24A0A075B6R9 120 aa14.45□□□□□ -0.1
CLIP2-202ENST00000361545 CDK2AP2O75956 126 aa14.45□□□□□ -0.1
CLIP2-202ENST00000361545 POLR3KQ9Y2Y1 108 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-202ENST00000361545 COX11Q9Y6N1 276 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 IGHV1-24A0A0C4DH33 117 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 ESM1Q9NQ30 184 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 DLX4Q92988 240 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-202ENST00000361545 CITED2Q99967 270 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-202ENST00000361545 NCKAP5O14513 1909 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 C22orf34Q6ZV56 151 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 PRSS29PA6NIE9 313 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 MORN5Q5VZ52 161 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 HIST2H2BCQ6DN03 193 aa14.44□□□□□ -0.1
CLIP2-202ENST00000361545 K7EN84 100 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 PCDH15Q96QU1 1955 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 LYPD6Q86Y78 171 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 HIVEP3Q5T1R4 2406 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 C2orf70A6NJV1 201 aa14.43□□□□□ -0.1
CLIP2-202ENST00000361545 BUB3O43684 328 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 NPSP0C0P6 89 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 C2orf82Q6UX34 121 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 KIR3DS1Q14943 382 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 RBAKDNA6NC62 111 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 XCL1P47992 114 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms