RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 HS3ST6Q96QI5 342 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 LY6G6EA0A0G2JKS1 128 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 NPBQ8NG41 125 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 U3KQA8 63 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
TRAF3-201ENST00000347662 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 RHOHQ15669 191 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 LYPD1Q8N2G4 141 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 C5orf63A6NC05 138 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 LYPD3O95274 346 aa9.44□□□□□ -0.9
TRAF3-201ENST00000347662 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 HERV-K104P63124 156 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 SPANXDQ9BXN6 97 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 GATA3P23771 443 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 IGKV1-12A0A0C4DH73 117 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 CRYGSP22914 178 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 CEND1Q8N111 149 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
TRAF3-201ENST00000347662 IGKV1-27A0A075B6S5 117 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 B3GALT5-AS1P59052 145 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 U3KQE9 123 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 DYNAPQ8N1N2 210 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 HIST3H2BBQ8N257 126 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 GYPEP15421 78 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 G3V318 75 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 K7ERJ3 54 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 LTAP01374 205 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 RNF5Q99942 180 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 DSCAMO60469 2012 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 MLANAQ16655 118 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 CD177Q8N6Q3 437 aa9.42□□□□□ -0.9
TRAF3-201ENST00000347662 HIST2H2BCQ6DN03 193 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 Q9H8V8 135 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 F8W1H4 67 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 TNRC6BQ9UPQ9 1833 aaKnown RBP9.41□□□□□ -0.9
TRAF3-201ENST00000347662 TSC2P49815 1807 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 ZNF134P52741 427 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 CCL24O00175 119 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 GFI1Q99684 422 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 LINC00205P59089 165 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 Q8N8P6 123 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 NUP210Q8TEM1 1887 aaPredicted RBP9.41□□□□□ -0.9
TRAF3-201ENST00000347662 NTF4P34130 210 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 PIP4P1Q86T03 277 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 Q86TA4 180 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 TMEM75Q8N9X5 138 aa9.41□□□□□ -0.9
TRAF3-201ENST00000347662 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 IGHV1-69DA0A0B4J2H0 117 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 COX7A2LO14548 114 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 IGHV1-69P01742 117 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 PRR4Q16378 134 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 H3BMG7 143 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 C9orf66Q5T8R8 295 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 DENND4AQ7Z401 1863 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 MUC4Q99102 2169 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 C9orf118A6NHY6 69 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 ETDBQ3ZM63 59 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 ZNF664Q8N3J9 261 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 GAFA1Q96PS6 74 aa9.4□□□□□ -0.9
TRAF3-201ENST00000347662 A0A0J9YWU9 116 aa9.4□□□□□ -0.91
TRAF3-201ENST00000347662 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.91
TRAF3-201ENST00000347662 A0A096LNI7 61 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 HGFACQ04756 655 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 DEFB125Q8N687 156 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 IGKV1D-8A0A087WSZ0 117 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 K7EM74 188 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
TRAF3-201ENST00000347662 PLXNB1O43157 2135 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 B5MCH6 92 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 TMEM14BQ9NUH8 114 aa9.39□□□□□ -0.91
TRAF3-201ENST00000347662 WT1P19544 449 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-201ENST00000347662 WDR86Q86TI4 376 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
TRAF3-201ENST00000347662 J3QQQ9 107 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
TRAF3-201ENST00000347662 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
TRAF3-201ENST00000347662 NTN5Q8WTR8 489 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms