RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 STX12Q86Y82 276 aa4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 OR1L4Q8NGR5 311 aa4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 LRRC20Q8TCA0 184 aa4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 SMIM3Q9BZL3 60 aa4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 WDR61Q9GZS3 305 aaKnown RBP4.28□□□□□ -1.72
RNFT1P3-201ENST00000340898 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 SMIM9A6NGZ8 99 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 FBLL1A6NHQ2 334 aaKnown RBP4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 C11orf94C9JXX5 98 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 BOLA2-SMG1P6H3BVE0 249 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 RPL12P30050 165 aaKnown RBP4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 S100A7P31151 101 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 RRN3P1Q2M238 152 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 EXOC3-AS1Q8N2X6 119 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 BLNKQ8WV28 456 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 PFDN5Q99471 154 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 SLC25A31Q9H0C2 315 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 MBD2Q9UBB5 411 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 HSPB11Q9Y547 144 aa4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 YTHDF2Q9Y5A9 579 aaKnown RBP4.27□□□□□ -1.73
RNFT1P3-201ENST00000340898 MPDU1O75352 247 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 HBE1P02100 147 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 OR10J4P0C629 311 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 HIST1H1EP10412 219 aaKnown RBP4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 HTN1P15515 57 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 CXCL2P19875 107 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 LINC01587Q99440 93 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 SLC50A1Q9BRV3 221 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 NIPSNAP3BQ9BS92 247 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 TMEM208Q9BTX3 173 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 TMEM14CQ9P0S9 112 aa4.26□□□□□ -1.73
RNFT1P3-201ENST00000340898 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 A0A087WYN8 130 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 TRAV12-3A0A0B4J271 114 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 ZNF253O75346 499 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 ZNF324O75467 553 aaPredicted RBP4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 INSP01308 110 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 NBEAP1P0C6P0 100 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 HTN3P15516 51 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 CDKN1BP46527 198 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 CD300CQ08708 224 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 GUK1Q16774 197 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 PRR9Q5T870 116 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 S100A7AQ86SG5 101 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 Q8NBF4 154 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 PHYHIPLQ96FC7 376 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 FAM19A4Q96LR4 140 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 ATP5SQ99766 215 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 VGLL1Q99990 258 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 OR51M1Q9H341 326 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 FUT9Q9Y231 359 aa4.25□□□□□ -1.73
RNFT1P3-201ENST00000340898 G3V3Q6 166 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 HMGB3O15347 200 aaKnown RBP4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 PTTG1O95997 202 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 DEFB130BP0DP73 79 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 DEFB130AP0DP74 79 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 TSPOP30536 169 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 TCTAP57738 103 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 TAS2R60P59551 318 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 DAD1P61803 113 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 BTN1A1Q13410 526 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 OXA1LQ15070 435 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 OR10J6PQ8NGY7 276 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 MED28Q9H204 178 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 RNF24Q9Y225 148 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 TIMM9Q9Y5J7 89 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
RNFT1P3-201ENST00000340898 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 LYRM9A8MSI8 78 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 KLLNB2CW77 178 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 H7BYZ3 331 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 RAB2AP61019 212 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 PDE6HQ13956 83 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 SSX7Q7RTT5 188 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 ZFAND2AQ8N6M9 145 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 SCGB1C1Q8TD33 95 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 LINC00479Q96M42 142 aa4.23□□□□□ -1.73
RNFT1P3-201ENST00000340898 MRPL32Q9BYC8 188 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms