RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MEIS3P1A6NDR6 274 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 M0R3E3 92 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 ARL6IP5O75915 188 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 PMP2P02689 132 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 ANXA7P20073 488 aaKnown RBP6.24□□□□□ -1.41
ATXN3-201ENST00000340660 AMTP48728 403 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 POMPQ9Y244 141 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 PXMP4Q9Y6I8 212 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 U3KQ87 197 aa6.24□□□□□ -1.41
ATXN3-201ENST00000340660 CTDSPLO15194 276 aa6.23□□□□□ -1.41
ATXN3-201ENST00000340660 CIDEAO60543 219 aa6.23□□□□□ -1.41
ATXN3-201ENST00000340660 ZNF546Q86UE3 836 aa6.23□□□□□ -1.41
ATXN3-201ENST00000340660 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
ATXN3-201ENST00000340660 LOC100130705A0A1B0GUX0 176 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 H3BQ15 152 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 GNRH2O43555 120 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 HYPMO75409 117 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 OR5G3P0C626 314 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 PHF5AQ7RTV0 110 aaKnown RBP6.22□□□□□ -1.41
ATXN3-201ENST00000340660 RNASE11Q8TAA1 199 aaKnown RBP6.22□□□□□ -1.41
ATXN3-201ENST00000340660 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
ATXN3-201ENST00000340660 IGLC2P0DOY2 106 aa6.21□□□□□ -1.42
ATXN3-201ENST00000340660 PATE2Q6UY27 113 aa6.21□□□□□ -1.42
ATXN3-201ENST00000340660 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
ATXN3-201ENST00000340660 AP4S1Q9Y587 144 aa6.21□□□□□ -1.42
ATXN3-201ENST00000340660 EIF5AP63241 154 aaKnown RBP6.2□□□□□ -1.42
ATXN3-201ENST00000340660 SURF2Q15527 256 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-201ENST00000340660 SP6Q3SY56 376 aa6.2□□□□□ -1.42
ATXN3-201ENST00000340660 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
ATXN3-201ENST00000340660 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-201ENST00000340660 OR2T35Q8NGX2 323 aa6.2□□□□□ -1.42
ATXN3-201ENST00000340660 PLCXD1Q9NUJ7 323 aa6.2□□□□□ -1.42
ATXN3-201ENST00000340660 TRAV18A0A075B6X5 111 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 SCGNO76038 276 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 TSHBP01222 138 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 PLP1P60201 277 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 LPCAT3Q6P1A2 487 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 CCDC197Q8NCU1 140 aa6.19□□□□□ -1.42
ATXN3-201ENST00000340660 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 IGKV2-40A0A087WW87 121 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-201ENST00000340660 IGKV2D-40P01614 121 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-201ENST00000340660 LINC00869P0C866 280 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 FCGR1AP12314 374 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 FGF8P55075 233 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-201ENST00000340660 FABP5Q01469 135 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 PIK3CD-AS1Q5SR53 167 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 OR10G7Q8NGN6 311 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 SLC39A9Q9NUM3 307 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 ZNF492Q9P255 531 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 NAGKQ9UJ70 344 aa6.18□□□□□ -1.42
ATXN3-201ENST00000340660 C3orf85A0A1B0GTC6 90 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-201ENST00000340660 RAB5CP51148 216 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 RND3P61587 244 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 ZNF266Q14584 549 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 DTD1Q8TEA8 209 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 YIPF6Q96EC8 236 aa6.17□□□□□ -1.42
ATXN3-201ENST00000340660 TYMSP04818 313 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 Q6AWC8 147 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 CYP2G1PQ6ZSU1 146 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 BPIFA4PQ86YQ2 179 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 OR13C8Q8NGS7 320 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 CYGBQ8WWM9 190 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 FAM107BQ9H098 131 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 RBM38Q9H0Z9 239 aaKnown RBP6.16□□□□□ -1.42
ATXN3-201ENST00000340660 ARV1Q9H2C2 271 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 RBKSQ9H477 322 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 ANAPC10Q9UM13 185 aa6.16□□□□□ -1.42
ATXN3-201ENST00000340660 LSM2Q9Y333 95 aaKnown RBP6.16□□□□□ -1.42
ATXN3-201ENST00000340660 A0A087WZ39 114 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 SMIM30A4D0T7 59 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 PDCD5O14737 125 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 IL5P05113 134 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 MT3P25713 68 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 AHSA2Q719I0 299 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 OR2G3Q8NGZ4 309 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 AAMDCQ9H7C9 122 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 IFT46Q9NQC8 304 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.42
ATXN3-201ENST00000340660 CALB2P22676 271 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 ATP5IP56385 69 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-201ENST00000340660 PIGPP57054 158 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 RBX1P62877 108 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-201ENST00000340660 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 UFD1Q92890 307 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 ARL6Q9H0F7 186 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 PARLQ9H300 379 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 DUSP21Q9H596 190 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 RHBDL2Q9NX52 303 aa6.14□□□□□ -1.43
ATXN3-201ENST00000340660 TRBV6-8A0A0A6YYG3 113 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 TRAV1-2A0A0B4J238 106 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 PGAM2P15259 253 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 RAB3BP20337 219 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 TAS2R46P59540 309 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 REG3AQ06141 175 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms