RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 IGKV3D-20A0A0C4DH25 116 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 IGHV4-28A0A0C4DH34 117 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 F8W036 122 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 GNRH2O43555 120 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 EMP1P54849 157 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 RPL23P62829 140 aaKnown RBP13.47□□□□□ -0.25
TSSC4-201ENST00000333256 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 Q8NAQ8 132 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 DAZAP1Q96EP5 407 aaKnown RBP13.47□□□□□ -0.25
TSSC4-201ENST00000333256 NEU1Q99519 415 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
TSSC4-201ENST00000333256 C19orf71A6NCJ1 209 aa13.46□□□□□ -0.26
TSSC4-201ENST00000333256 B4DEV8 164 aa13.46□□□□□ -0.26
TSSC4-201ENST00000333256 TYMSP04818 313 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 NHLRC4P0CG21 123 aaPredicted RBP13.45□□□□□ -0.26
TSSC4-201ENST00000333256 MIFP14174 115 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 TDRG1Q3Y452 100 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
TSSC4-201ENST00000333256 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 BIN3Q9NQY0 253 aa13.45□□□□□ -0.26
TSSC4-201ENST00000333256 GRIFINA4D1Z8 144 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 SMIM9A6NGZ8 99 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 KRBOX1C9JBD0 128 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 P01737 135 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 KCNS1Q96KK3 526 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 LINC00467Q9BRT7 94 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 MDFICQ9P1T7 246 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 ERVFC1-1P60608 527 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 IBA57Q5T440 356 aaKnown RBP13.44□□□□□ -0.26
TSSC4-201ENST00000333256 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
TSSC4-201ENST00000333256 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
TSSC4-201ENST00000333256 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 PLAC8L1A1L4L8 177 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 TMEM189A5PLL7 270 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 OR2D3Q8NGH3 330 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 SEC11CQ9BY50 192 aa13.43□□□□□ -0.26
TSSC4-201ENST00000333256 C11orf72Q8NBR9 251 aa13.42□□□□□ -0.26
TSSC4-201ENST00000333256 C16orf74Q96GX8 76 aa13.42□□□□□ -0.26
TSSC4-201ENST00000333256 TIMM8BQ9Y5J9 83 aaPredicted RBP13.42□□□□□ -0.26
TSSC4-201ENST00000333256 TRGV11A0A075B6L2 103 aa13.41□□□□□ -0.26
TSSC4-201ENST00000333256 IGHV3-16A0A0C4DH30 117 aa13.41□□□□□ -0.26
TSSC4-201ENST00000333256 GZMBP10144 247 aa13.41□□□□□ -0.26
TSSC4-201ENST00000333256 NDUFA5Q16718 116 aa13.41□□□□□ -0.26
TSSC4-201ENST00000333256 SFRP2Q96HF1 295 aa13.4□□□□□ -0.26
TSSC4-201ENST00000333256 U3KQK5 164 aa13.4□□□□□ -0.26
TSSC4-201ENST00000333256 ZNF493Q6ZR52 646 aa13.4□□□□□ -0.26
TSSC4-201ENST00000333256 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
TSSC4-201ENST00000333256 RPP21Q9H633 154 aaKnown RBP13.4□□□□□ -0.26
TSSC4-201ENST00000333256 NOP10Q9NPE3 64 aaKnown RBP13.4□□□□□ -0.26
TSSC4-201ENST00000333256 SNURFLB1AK76 121 aa13.39□□□□□ -0.27
TSSC4-201ENST00000333256 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
TSSC4-201ENST00000333256 S100A4P26447 101 aaKnown RBP13.39□□□□□ -0.27
TSSC4-201ENST00000333256 ASIPP42127 132 aa13.39□□□□□ -0.27
TSSC4-201ENST00000333256 ZNF415Q09FC8 603 aa13.39□□□□□ -0.27
TSSC4-201ENST00000333256 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
TSSC4-201ENST00000333256 H3BVH4 76 aa13.38□□□□□ -0.27
TSSC4-201ENST00000333256 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
TSSC4-201ENST00000333256 PNRC1Q12796 327 aaPredicted RBP13.38□□□□□ -0.27
TSSC4-201ENST00000333256 C10orf91Q5T1B1 145 aa13.38□□□□□ -0.27
TSSC4-201ENST00000333256 STAB2Q8WWQ8 2551 aa13.38□□□□□ -0.27
TSSC4-201ENST00000333256 TCL1AP56279 114 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 FAM222AQ5U5X8 452 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 C15orf54Q8N8G6 183 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 OR10G8Q8NGN5 311 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
TSSC4-201ENST00000333256 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 CARHSP1Q9Y2V2 147 aaKnown RBP13.37□□□□□ -0.27
TSSC4-201ENST00000333256 TGP01266 2768 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 APOC3P02656 99 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 ARMS2P0C7Q2 107 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 IL17DQ8TAD2 202 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 TPPP3Q9BW30 176 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 V9GYV3 84 aa13.37□□□□□ -0.27
TSSC4-201ENST00000333256 MUC21A0A0G2JKD1 596 aa13.36□□□□□ -0.27
TSSC4-201ENST00000333256 MUC21A0A140T8X8 626 aa13.36□□□□□ -0.27
TSSC4-201ENST00000333256 SSTP61278 116 aa13.35□□□□□ -0.27
TSSC4-201ENST00000333256 RNF212Q495C1 297 aa13.35□□□□□ -0.27
TSSC4-201ENST00000333256 C9orf85Q96MD7 179 aa13.35□□□□□ -0.27
TSSC4-201ENST00000333256 MRPL16Q9NX20 251 aaKnown RBP13.35□□□□□ -0.27
TSSC4-201ENST00000333256 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
TSSC4-201ENST00000333256 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
TSSC4-201ENST00000333256 Q6ZTI0 123 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 TRGV1A0A0A0MS02 117 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 DEFB130BP0DP73 79 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 DEFB130AP0DP74 79 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 DAZ2Q13117 558 aaKnown RBP13.34□□□□□ -0.27
TSSC4-201ENST00000333256 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
TSSC4-201ENST00000333256 GAGE12BA1L429 117 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 GAGE7O76087 117 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 GAGE12FP0CL80 117 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 GAGE12GP0CL81 117 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 GAGE12IP0CL82 117 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
TSSC4-201ENST00000333256 GTSF1Q8WW33 167 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms