RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SRSF1Q07955 248 aaKnown RBP eCLIP8.12□□□□□ -1.118e-7■■■■□ 19.5
CUL4A-201ENST00000326335 KIR2DL5AQ8N109 375 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 LYPD1Q8N2G4 141 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 C7orf71A4D174 169 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 LEPP41159 167 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 FAM104BQ5XKR9 115 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 PHLDA3Q9Y5J5 127 aa8.12□□□□□ -1.11
CUL4A-201ENST00000326335 C20orf202A1L168 122 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 NUDT3O95989 172 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 MPV17L2Q567V2 206 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 C21orf62-AS1Q17RA5 79 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
CUL4A-201ENST00000326335 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 DKK2Q9UBU2 259 aa8.11□□□□□ -1.11
CUL4A-201ENST00000326335 WFDC11Q8NEX6 87 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 VWFP04275 2813 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 SLURP1P55000 103 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
CUL4A-201ENST00000326335 NPSP0C0P6 89 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 CT83Q5H943 113 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
CUL4A-201ENST00000326335 CD7P09564 240 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 TMEM160Q9NX00 188 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 OTOGQ6ZRI0 2925 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 A6NDX4 124 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 ESDP10768 282 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 TSPOP30536 169 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 KLHDC1Q8N7A1 406 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 LINC01356Q8N9X3 169 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 SLC50A1Q9BRV3 221 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
CUL4A-201ENST00000326335 PEF1Q9UBV8 284 aaKnown RBP8.09□□□□□ -1.11
CUL4A-201ENST00000326335 TCF21O43680 179 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 FCER1GP30273 86 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 NUTF2P61970 127 aaKnown RBP8.08□□□□□ -1.12
CUL4A-201ENST00000326335 RASL11AQ6T310 242 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 IGHG2P01859 326 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 TMEM158Q8WZ71 300 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 FOXC2Q99958 501 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 GOLT1BQ9Y3E0 138 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 KLF5Q13887 457 aaPredicted RBP8.08□□□□□ -1.12
CUL4A-201ENST00000326335 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 DAZ1Q9NQZ3 744 aaKnown RBP8.08□□□□□ -1.12
CUL4A-201ENST00000326335 HSPB8Q9UJY1 196 aa8.08□□□□□ -1.12
CUL4A-201ENST00000326335 IGHV4OR15-8A0A075B7B6 117 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 A0A087WW49 117 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 ANKRD39Q53RE8 183 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 GPHB5Q86YW7 130 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 C20orf144Q9BQM9 153 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 ZNF256Q9Y2P7 627 aaPredicted RBP8.07□□□□□ -1.12
CUL4A-201ENST00000326335 SMIM12Q96EX1 92 aa8.07□□□□□ -1.12
CUL4A-201ENST00000326335 ZNF48Q96MX3 618 aaPredicted RBP8.07□□□□□ -1.12
CUL4A-201ENST00000326335 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 C16orf54Q6UWD8 224 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 GTSCR1Q86UQ5 136 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 FAM223BA6NKX1 122 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 VAMP3Q15836 100 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 FAM223AQ8IWN6 122 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 IFI27L1Q96BM0 104 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 MUC4Q99102 2169 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 AKAP9Q99996 3911 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 A0A0G2JLM5 398 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 PCP2Q8IVA1 136 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 OR2K2Q8NGT1 345 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 DPF1Q92782 380 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 C2orf88Q9BSF0 95 aa8.06□□□□□ -1.12
CUL4A-201ENST00000326335 NDUFS8O00217 210 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 S100A7P31151 101 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 APRG1Q8IVJ8 170 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
CUL4A-201ENST00000326335 IGHV7-4-1A0A0J9YVY3 117 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 K7EP13 123 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 CTRLP40313 264 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 SLC25A34Q6PIV7 304 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 SMR3AQ99954 134 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 A0A096LNJ9 63 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 HBDP02042 147 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 TMEM208Q9BTX3 173 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 MEGF9Q9H1U4 602 aa8.05□□□□□ -1.12
CUL4A-201ENST00000326335 NDUFA4O00483 81 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 HOXD3P31249 432 aaPredicted RBP8.04□□□□□ -1.12
CUL4A-201ENST00000326335 MS4A6AQ9H2W1 248 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 TENM1Q9UKZ4 2725 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 FAM231BA6NCW3 169 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 COL5A1-AS1Q5SY13 56 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 TMEM190Q8WZ59 177 aa8.04□□□□□ -1.12
CUL4A-201ENST00000326335 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms