RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
RNF40-201ENST00000324685 DEFB125Q8N687 156 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 PCP2Q8IVA1 136 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 KIR2DL5BA0A0G2JN68 375 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 KIR2DL5BA0A0G2JPC4 375 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 A0A0J9YY99 117 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 KIR2DL5AQ8N109 375 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 NPBQ8NG41 125 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 TEX48A0A1B0GUV7 120 aa16.47■□□□□ 0.23
RNF40-201ENST00000324685 C16orf74Q96GX8 76 aa16.46■□□□□ 0.23
RNF40-201ENST00000324685 FUSP35637 526 aaKnown RBP eCLIP16.46■□□□□ 0.23
RNF40-201ENST00000324685 DEFB112Q30KQ8 113 aa16.46■□□□□ 0.23
RNF40-201ENST00000324685 CCL25O15444 150 aa16.46■□□□□ 0.23
RNF40-201ENST00000324685 Q6ZQT7 251 aa16.46■□□□□ 0.23
RNF40-201ENST00000324685 DEFB105AQ8NG35 78 aa16.46■□□□□ 0.23
RNF40-201ENST00000324685 H0YGX0 51 aa16.46■□□□□ 0.22
RNF40-201ENST00000324685 PLA2G2CQ5R387 149 aa16.46■□□□□ 0.22
RNF40-201ENST00000324685 ARTNQ5T4W7 220 aa16.46■□□□□ 0.22
RNF40-201ENST00000324685 CTSZQ9UBR2 303 aa16.46■□□□□ 0.22
RNF40-201ENST00000324685 TRAV4A0A0B4J268 109 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 H3BQ85 93 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 K7EQD1 137 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 Q6ZVH6 145 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 CCL24O00175 119 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 C11orf53Q8IXP5 236 aa16.45■□□□□ 0.22
RNF40-201ENST00000324685 GP9P14770 177 aa16.44■□□□□ 0.22
RNF40-201ENST00000324685 IGLL5B9A064 214 aa16.44■□□□□ 0.22
RNF40-201ENST00000324685 C1orf43Q9BWL3 253 aa16.44■□□□□ 0.22
RNF40-201ENST00000324685 ETDCA0A1B0GVM5 59 aa16.44■□□□□ 0.22
RNF40-201ENST00000324685 CENPVL3A0A0U1RRI6 287 aa16.43■□□□□ 0.22
RNF40-201ENST00000324685 BUB3O43684 328 aa16.43■□□□□ 0.22
RNF40-201ENST00000324685 COA6Q5JTJ3 125 aaKnown RBP16.43■□□□□ 0.22
RNF40-201ENST00000324685 DAZ2Q13117 558 aaKnown RBP16.43■□□□□ 0.22
RNF40-201ENST00000324685 DAZ4Q86SG3 579 aaKnown RBP16.43■□□□□ 0.22
RNF40-201ENST00000324685 DAZ3Q9NR90 486 aaKnown RBP16.43■□□□□ 0.22
RNF40-201ENST00000324685 I3L2K1 104 aa16.43■□□□□ 0.22
RNF40-201ENST00000324685 IGHV4-59P01825 116 aa16.43■□□□□ 0.22
RNF40-201ENST00000324685 SH2D6Q7Z4S9 175 aa16.43■□□□□ 0.22
RNF40-201ENST00000324685 J3QKU1 62 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 IGHG2P01859 326 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 GATA1P15976 413 aaPredicted RBP16.42■□□□□ 0.22
RNF40-201ENST00000324685 VWA8A3KMH1 1905 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 ICOSQ9Y6W8 199 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 COL4A6Q14031 1691 aa16.42■□□□□ 0.22
RNF40-201ENST00000324685 RPL39LQ96EH5 51 aaKnown RBP16.42■□□□□ 0.22
RNF40-201ENST00000324685 ZFP2Q6ZN57 461 aa16.41■□□□□ 0.22
RNF40-201ENST00000324685 RTTNQ86VV8 2226 aa16.41■□□□□ 0.22
RNF40-201ENST00000324685 RPL18AQ02543 176 aaKnown RBP16.41■□□□□ 0.22
RNF40-201ENST00000324685 C5orf38Q86SI9 138 aa16.41■□□□□ 0.22
RNF40-201ENST00000324685 C9orf66Q5T8R8 295 aa16.4■□□□□ 0.22
RNF40-201ENST00000324685 RS1O15537 224 aa16.4■□□□□ 0.22
RNF40-201ENST00000324685 CAMK2N2Q96S95 79 aa16.4■□□□□ 0.22
RNF40-201ENST00000324685 A0A0B4J2C4 111 aa16.39■□□□□ 0.22
RNF40-201ENST00000324685 DKK4Q9UBT3 224 aa16.39■□□□□ 0.22
RNF40-201ENST00000324685 CEP290O15078 2479 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 MUSTN1Q8IVN3 82 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 SND1-IT1Q9HBX3 110 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 MRPL23Q16540 153 aaKnown RBP16.39■□□□□ 0.21
RNF40-201ENST00000324685 ATP6V0E2Q8NHE4 81 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 MYO7BQ6PIF6 2116 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 IGLV11-55A0A075B6I3 123 aa16.39■□□□□ 0.21
RNF40-201ENST00000324685 COX7B2Q8TF08 81 aa16.38■□□□□ 0.21
RNF40-201ENST00000324685 FNDC1Q4ZHG4 1894 aaPredicted RBP16.38■□□□□ 0.21
RNF40-201ENST00000324685 COX7A2LO14548 114 aa16.38■□□□□ 0.21
RNF40-201ENST00000324685 C16orf54Q6UWD8 224 aa16.38■□□□□ 0.21
RNF40-201ENST00000324685 IGHV7-81A0A0B4J1V7 117 aa16.38■□□□□ 0.21
RNF40-201ENST00000324685 GYPEP15421 78 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 KRTAP27-1Q3LI81 207 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 YLPM1P49750 1951 aaKnown RBP16.37■□□□□ 0.21
RNF40-201ENST00000324685 APRG1Q8IVJ8 170 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 K7EIM0 57 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 IGFBPL1Q8WX77 278 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 Q9HAA7 133 aa16.37■□□□□ 0.21
RNF40-201ENST00000324685 PHF3Q92576 2039 aaKnown RBP16.37■□□□□ 0.21
RNF40-201ENST00000324685 TCF20Q9UGU0 1960 aaKnown RBP16.36■□□□□ 0.21
RNF40-201ENST00000324685 Q71RC1 249 aaPredicted RBP16.36■□□□□ 0.21
RNF40-201ENST00000324685 OPRPNQ99935 248 aaPredicted RBP16.36■□□□□ 0.21
RNF40-201ENST00000324685 TIRAPP58753 221 aa16.36■□□□□ 0.21
RNF40-201ENST00000324685 MRPL36Q9P0J6 103 aaKnown RBP16.36■□□□□ 0.21
RNF40-201ENST00000324685 ZNF503Q96F45 646 aa16.36■□□□□ 0.21
RNF40-201ENST00000324685 KLF2Q9Y5W3 355 aaPredicted RBP16.36■□□□□ 0.21
RNF40-201ENST00000324685 ATP5G1P05496 136 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 SLURP1P55000 103 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 DEFB136Q30KP8 78 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 AJUBAQ96IF1 538 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 IGHV4-4A0A075B6R2 117 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 HIST2H2BCQ6DN03 193 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 PRSS33Q8NF86 280 aa16.35■□□□□ 0.21
RNF40-201ENST00000324685 ATOX1O00244 68 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 INTS1Q8N201 2190 aaKnown RBP16.34■□□□□ 0.21
RNF40-201ENST00000324685 KIAA2026Q5HYC2 2103 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 A0A0J9YXV3 536 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 A4D1N5 150 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 SPART-AS1P0CW21 52 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 HIGD1BQ9P298 99 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 B5MCH6 92 aa16.34■□□□□ 0.21
RNF40-201ENST00000324685 TRIOBPQ9H2D6 2365 aa16.33■□□□□ 0.21
RNF40-201ENST00000324685 SPRY2O43597 315 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms