RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 B5MCH6 92 aa12□□□□□ -0.49
VARS2-201ENST00000321897 C9JAW5 83 aa12□□□□□ -0.49
VARS2-201ENST00000321897 PAX8Q06710 450 aa12□□□□□ -0.49
VARS2-201ENST00000321897 CRXO43186 299 aaPredicted RBP12□□□□□ -0.49
VARS2-201ENST00000321897 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
VARS2-201ENST00000321897 PRRC2AP48634 2157 aaKnown RBP12□□□□□ -0.49
VARS2-201ENST00000321897 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 ZNF562Q6V9R5 426 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
VARS2-201ENST00000321897 CLUHP3Q96NS8 147 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 TRAV41A0A0B4J266 112 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 IGKV3OR2-268A0A0C4DH90 116 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 CEACAM4O75871 244 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 CGB3P0DN86 165 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 CGB7P0DN87 165 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 CD7P09564 240 aa11.99□□□□□ -0.49
VARS2-201ENST00000321897 ZZEF1O43149 2961 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 IL17RELQ6ZVW7 336 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 FCN3O75636 299 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 SLC25A16P16260 332 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
VARS2-201ENST00000321897 F6UB75 175 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 OVOL3O00110 214 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 PTH2Q96A98 100 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 NPFFO15130 113 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 CEND1Q8N111 149 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 ZNF292O60281 2723 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 KALRNO60229 2985 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 Q8N7P7 452 aa11.97□□□□□ -0.49
VARS2-201ENST00000321897 F8W1H4 67 aa11.96□□□□□ -0.49
VARS2-201ENST00000321897 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
VARS2-201ENST00000321897 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.49
VARS2-201ENST00000321897 AKAP13Q12802 2813 aa11.96□□□□□ -0.49
VARS2-201ENST00000321897 PRSS47A8MTI9 375 aa11.96□□□□□ -0.5
VARS2-201ENST00000321897 SIGLEC15Q6ZMC9 328 aa11.96□□□□□ -0.5
VARS2-201ENST00000321897 C20orf78Q9BR46 151 aa11.96□□□□□ -0.5
VARS2-201ENST00000321897 MSRB2Q9Y3D2 182 aa11.96□□□□□ -0.5
VARS2-201ENST00000321897 ID1P41134 155 aa11.96□□□□□ -0.5
VARS2-201ENST00000321897 ASIPP42127 132 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 PSMG4Q5JS54 123 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 CRYBA4P53673 196 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 A0A087WWL8 130 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 IGLL5B9A064 214 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 K7EIM0 57 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 IGLV2-23P01705 113 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 COX6B1P14854 86 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 C10orf126Q8N4M7 172 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 C3orf56Q8N813 242 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
VARS2-201ENST00000321897 VWC2LB2RUY7 222 aa11.94□□□□□ -0.5
VARS2-201ENST00000321897 EGR2P11161 476 aaPredicted RBP11.94□□□□□ -0.5
VARS2-201ENST00000321897 LINC00311Q8N616 119 aa11.94□□□□□ -0.5
VARS2-201ENST00000321897 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
VARS2-201ENST00000321897 H7C1H1 209 aa11.94□□□□□ -0.5
VARS2-201ENST00000321897 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
VARS2-201ENST00000321897 PRSS46E5RG02 174 aa11.93□□□□□ -0.5
VARS2-201ENST00000321897 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
VARS2-201ENST00000321897 PRADC1Q9BSG0 188 aa11.93□□□□□ -0.5
VARS2-201ENST00000321897 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
VARS2-201ENST00000321897 PRR25Q96S07 402 aa11.93□□□□□ -0.5
VARS2-201ENST00000321897 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
VARS2-201ENST00000321897 ERG28Q9UKR5 140 aa11.93□□□□□ -0.5
VARS2-201ENST00000321897 CDSNQ15517 529 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 DTX2Q86UW9 622 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 A0A1B0GXF2 115 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
VARS2-201ENST00000321897 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
VARS2-201ENST00000321897 GP9P14770 177 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 PLNP26678 52 aa11.92□□□□□ -0.5
VARS2-201ENST00000321897 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 C1orf159Q96HA4 380 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 TMEM262E9PQX1 116 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 PRAC2D3DTV9 90 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 M0R1W7 72 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 FOXI2Q6ZQN5 318 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
VARS2-201ENST00000321897 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 I3L2K1 104 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 RRN3P1Q2M238 152 aa11.9□□□□□ -0.5
VARS2-201ENST00000321897 Q71RC1 249 aaPredicted RBP11.9□□□□□ -0.5
VARS2-201ENST00000321897 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
VARS2-201ENST00000321897 TET2Q6N021 2002 aaPredicted RBP11.9□□□□□ -0.5
VARS2-201ENST00000321897 COL12A1Q99715 3063 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms