RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 HCFC1P51610 2035 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 LGALS9O00182 355 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 DEFA6Q01524 100 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 C20orf144Q9BQM9 153 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 MS4A6AQ9H2W1 248 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 KLF12Q9Y4X4 402 aa6.62□□□□□ -1.35
PDLIM5-201ENST00000317968 M0R2P5 195 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 TYMSP04818 313 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 USP9YO00507 2555 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 C9JQL5 133 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 SH2D1AO60880 128 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 CTAG1AP78358 180 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 TEX43Q6ZNM6 134 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 C2orf70A6NJV1 201 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 F8WEM9 126 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 ATRAIDQ6UW56 229 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 PMCHL2Q9BQD1 86 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 TMEM243Q9BU79 118 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 TNFRSF6BO95407 300 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 EXOC3-AS1Q8N2X6 119 aa6.61□□□□□ -1.35
PDLIM5-201ENST00000317968 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 C11orf45Q8TAV5 145 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 TRAV2A0A0B4J234 112 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 S100A7L2Q5SY68 101 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 GAGE12JA6NER3 117 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 COLCA2A8K830 154 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 CFHR3Q02985 330 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 GAGE1Q13065 139 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 GAGE4Q13068 117 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 GAGE5Q13069 117 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 GAGE13Q4V321 117 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 C12orf57Q99622 126 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 RNF182Q8N6D2 247 aa6.6□□□□□ -1.35
PDLIM5-201ENST00000317968 SMIM9A6NGZ8 99 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 RAI1Q7Z5J4 1906 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 IGLC2P0DOY2 106 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 C6orf226Q5I0X4 101 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 ADMP35318 185 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 HIGD1CA8MV81 97 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 PHOX2AO14813 284 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 TRGC2P03986 189 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
PDLIM5-201ENST00000317968 LTAP01374 205 aa6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 KRTAP10-9P60411 292 aa6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 PRR25Q96S07 402 aa6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 C1orf43Q9BWL3 253 aa6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 LAMTOR2Q9Y2Q5 125 aa6.59□□□□□ -1.36
PDLIM5-201ENST00000317968 CXCL1P09341 107 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 SIGLEC8Q9NYZ4 499 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 IGHV1-24A0A0C4DH33 117 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 SMIM6P0DI80 62 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 Q6ZSV7 163 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 CCDC140Q96MF4 163 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 LAMA2P24043 3122 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 SNRPEP62304 92 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 DERL1Q9BUN8 251 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 USP9XQ93008 2570 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 ZNF815PA8K554 130 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 LAGE3Q14657 143 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 NKAPP1Q8N9T2 125 aa6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-201ENST00000317968 IGKV2D-24A0A075B6R9 120 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 LINC00158P58513 81 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 RNASE7Q9H1E1 156 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 IGLL5B9A064 214 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 SLC17A3O00476 420 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 FSHBP01225 129 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 EGR2P11161 476 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 COX11Q9Y6N1 276 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 PSMB8P28062 276 aa6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-201ENST00000317968 IGLL1P15814 213 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 PLEKHB2Q96CS7 222 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 JPT2Q9H910 190 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 A8MWP6 167 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 I3L3M4 83 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 CST9LQ9H4G1 147 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 AVPP01185 164 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 ZNF702PQ9H963 129 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms