RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MYCNOSP40205 109 aa10.09□□□□□ -0.79
CPNE1-201ENST00000317677 FXYD2P54710 66 aa10.09□□□□□ -0.79
CPNE1-201ENST00000317677 LYZP61626 148 aa10.09□□□□□ -0.79
CPNE1-201ENST00000317677 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-201ENST00000317677 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
CPNE1-201ENST00000317677 ZNF469Q96JG9 3925 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-201ENST00000317677 A6NDX4 124 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 FOXI1Q12951 378 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 LY6EQ16553 131 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 RAX2Q96IS3 184 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 A0A1B0GW15 77 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 FBLL1A6NHQ2 334 aaKnown RBP10.08□□□□□ -0.8
CPNE1-201ENST00000317677 H3BUX3 64 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 IGHV4-31P0DP07 118 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 GP9P14770 177 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 TAL2Q16559 108 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 PCP2Q8IVA1 136 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 ZNF491Q8N8L2 437 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
CPNE1-201ENST00000317677 A0A096LNJ9 63 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 P01737 135 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 GCSHP23434 173 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 MFAP4P55083 255 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 Q6ZUT4 128 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 Q96MF0 132 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 C21orf62Q9NYP8 219 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
CPNE1-201ENST00000317677 WI2-2373I1.2A0A1W2PRP0 233 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 Q6ZS46 218 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 CEND1Q8N111 149 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-201ENST00000317677 LINC00527Q9UJ94 153 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 EPDR1Q9UM22 224 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 H3BMG7 143 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 TGFAP01135 160 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 INSL3P51460 131 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 CRIP2P52943 208 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-201ENST00000317677 HERV-K104P63124 156 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
CPNE1-201ENST00000317677 H3BTX0 84 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 FSHBP01225 129 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 CTSGP08311 255 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 SYT8Q8NBV8 401 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 RNF125Q96EQ8 232 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 H3BRN7 92 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 APOMO95445 188 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 LTAP01374 205 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 IL4P05112 153 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 LINC00322Q6ZN03 302 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-201ENST00000317677 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 CHAC1Q9BUX1 264 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
CPNE1-201ENST00000317677 J3QLI3 93 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 IGHG4P01861 327 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 CSN3P07498 182 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 NMUP48645 174 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 CACNG7P62955 275 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 DAZAP1Q96EP5 407 aaKnown RBP10.04□□□□□ -0.8
CPNE1-201ENST00000317677 FMC1Q96HJ9 113 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 CCDC140Q96MF4 163 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 SHANK2-AS3Q9BTD1 123 aa10.04□□□□□ -0.8
CPNE1-201ENST00000317677 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.81e-8■□□□□ 10.5
CPNE1-201ENST00000317677 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
CPNE1-201ENST00000317677 BLCAPP62952 87 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 RIGQ13278 110 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 U3KQK5 164 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 NF1P21359 2839 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 TRAV41A0A0B4J266 112 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 K7ERJ3 54 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 XGP55808 180 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 GNG5P63218 68 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 Q6AWC8 147 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
CPNE1-201ENST00000317677 TMEM14CQ9P0S9 112 aa10.03□□□□□ -0.8
CPNE1-201ENST00000317677 NSD1Q96L73 2696 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-201ENST00000317677 A0A1B0GUT8 65 aa10.02□□□□□ -0.81
CPNE1-201ENST00000317677 IGHV4-59P01825 116 aa10.02□□□□□ -0.81
CPNE1-201ENST00000317677 IGHG2P01859 326 aa10.02□□□□□ -0.81
CPNE1-201ENST00000317677 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
CPNE1-201ENST00000317677 C17orf77Q96MU5 243 aa10.02□□□□□ -0.81
CPNE1-201ENST00000317677 HBDP02042 147 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 IGF1P05019 195 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms