RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 EMP1P54849 157 aa12.68□□□□□ -0.38
SSH3-201ENST00000308127 LAGE3Q14657 143 aa12.68□□□□□ -0.38
SSH3-201ENST00000308127 ITPR1Q14643 2758 aa12.68□□□□□ -0.38
SSH3-201ENST00000308127 ABCA2Q9BZC7 2435 aa12.68□□□□□ -0.38
SSH3-201ENST00000308127 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 IGHV3-11P01762 117 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 SRD5A1P18405 259 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 C14orf178Q8N769 122 aaPredicted RBP12.67□□□□□ -0.38
SSH3-201ENST00000308127 FAM110DQ8TAY7 271 aaPredicted RBP12.67□□□□□ -0.38
SSH3-201ENST00000308127 K7ENP7 123 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 MGPP08493 103 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 WFDC2Q14508 124 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 UBTD1Q9HAC8 227 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 H3BMG7 143 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 UNQ9165/PRO28630Q6UXU0 137 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 CEND1Q8N111 149 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 METTL26Q96S19 204 aa12.67□□□□□ -0.38
SSH3-201ENST00000308127 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 AJUBAQ96IF1 538 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
SSH3-201ENST00000308127 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
SSH3-201ENST00000308127 USP9YO00507 2555 aaPredicted RBP12.65□□□□□ -0.38
SSH3-201ENST00000308127 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
SSH3-201ENST00000308127 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
SSH3-201ENST00000308127 BPESC1Q9GZL8 116 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 GTSF1LQ9H1H1 148 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 FLNCQ14315 2725 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 EBI3Q14213 229 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 SLC50A1Q9BRV3 221 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 POLQO75417 2590 aa12.64□□□□□ -0.39
SSH3-201ENST00000308127 TMEM238C9JI98 176 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 GNRH2O43555 120 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 ATP5LO75964 103 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 LY6EQ16553 131 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 OR5A1Q8NGJ0 315 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
SSH3-201ENST00000308127 IGLL5B9A064 214 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.62□□□□□ -0.39
SSH3-201ENST00000308127 EDN2P20800 178 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
SSH3-201ENST00000308127 ETDBQ3ZM63 59 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 EEF1AKMT3Q96AZ1 226 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 SCGB3A1Q96QR1 104 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 RAXQ9Y2V3 346 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 A0A087WX48 190 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 MINOS1Q5TGZ0 78 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 MINOS1-NBL1R4GNA1 71 aa12.62□□□□□ -0.39
SSH3-201ENST00000308127 C12orf74Q32Q52 190 aa12.61□□□□□ -0.39
SSH3-201ENST00000308127 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSH3-201ENST00000308127 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
SSH3-201ENST00000308127 JPT2Q9H910 190 aa12.61□□□□□ -0.39
SSH3-201ENST00000308127 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 LINC01546A6NGU7 62 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 INSL3P51460 131 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 RASL10AQ92737 203 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
SSH3-201ENST00000308127 SMAGPQ0VAQ4 97 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 KLHL30-AS1Q8NEE0 82 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 MUC4Q99102 2169 aa12.6□□□□□ -0.39
SSH3-201ENST00000308127 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
SSH3-201ENST00000308127 RBAKDNA6NC62 111 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 ARL3P36405 182 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 UBE2E1P51965 193 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 FBXL19-AS1Q494R0 122 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
SSH3-201ENST00000308127 TSSC4Q9Y5U2 329 aaPredicted RBP12.59□□□□□ -0.39
SSH3-201ENST00000308127 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
SSH3-201ENST00000308127 SCGB2A2Q13296 93 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
SSH3-201ENST00000308127 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 NOTCH3Q9UM47 2321 aa12.58□□□□□ -0.4
SSH3-201ENST00000308127 NPFFO15130 113 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 TGFAP01135 160 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 C5orf56Q8N8D9 126 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 E9PLD3 99 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 F8VRH5 84 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 Q6ZS46 218 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 ZFAND2AQ8N6M9 145 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
SSH3-201ENST00000308127 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 C2orf66Q6UXQ4 117 aa12.56□□□□□ -0.4
SSH3-201ENST00000308127 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms