RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HSPB8Q9UJY1 196 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 A0A0J9YX75 114 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 DUSP14O95147 198 aaKnown RBP14.55□□□□□ -0.08
HOXC4-201ENST00000303406 ASIPP42127 132 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 OR1N2Q8NGR9 330 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 DPF1Q92782 380 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 TMEM70Q9BUB7 260 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 SCRT2Q9NQ03 307 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 SIGLEC8Q9NYZ4 499 aa14.55□□□□□ -0.08
HOXC4-201ENST00000303406 LINC01546A6NGU7 62 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 TCF21O43680 179 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 CSN3P07498 182 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 RNASE4P34096 147 aaKnown RBP14.54□□□□□ -0.08
HOXC4-201ENST00000303406 SSTP61278 116 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 PSMG4Q5JS54 123 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 ADAMTSL5Q6ZMM2 481 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 Q6ZQT7 251 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 NDUFAF3Q9BU61 184 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 TENM4Q6N022 2769 aa14.54□□□□□ -0.08
HOXC4-201ENST00000303406 CHD6Q8TD26 2715 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 RNASE1P07998 156 aaKnown RBP14.53□□□□□ -0.08
HOXC4-201ENST00000303406 ZNF688P0C7X2 276 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 SLURP1P55000 103 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 SPANXN1Q5VSR9 72 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 C18orf65Q6ZTR6 163 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 OR11H1Q8NG94 326 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 C16orf95Q9H693 158 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 ESM1Q9NQ30 184 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 ZANQ9Y493 2812 aa14.53□□□□□ -0.08
HOXC4-201ENST00000303406 H3BVH4 76 aa14.52□□□□□ -0.08
HOXC4-201ENST00000303406 NPYP01303 97 aa14.52□□□□□ -0.08
HOXC4-201ENST00000303406 IFI27P40305 119 aaPredicted RBP14.52□□□□□ -0.08
HOXC4-201ENST00000303406 FOXI2Q6ZQN5 318 aa14.52□□□□□ -0.08
HOXC4-201ENST00000303406 OR9G4Q8NGQ1 327 aa14.52□□□□□ -0.08
HOXC4-201ENST00000303406 MAP1LC3AQ9H492 121 aa14.52□□□□□ -0.08
HOXC4-201ENST00000303406 TSPOP30536 169 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 ITPR3Q14573 2671 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 MAP1AP78559 2803 aaPredicted RBP14.51□□□□□ -0.09
HOXC4-201ENST00000303406 C20orf202A1L168 122 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 PRSS47A8MTI9 375 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 SYS1-DBNDD2H3BUS1 97 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 J3KRW8 73 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 S100A4P26447 101 aaKnown RBP14.51□□□□□ -0.09
HOXC4-201ENST00000303406 TFPI2P48307 235 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 KLHL30-AS1Q8NEE0 82 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 C14orf144Q96I85 54 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 SELENOKQ9Y6D0 94 aa14.51□□□□□ -0.09
HOXC4-201ENST00000303406 C7orf71A4D174 169 aa14.5□□□□□ -0.09
HOXC4-201ENST00000303406 NXPH4O95158 308 aa14.5□□□□□ -0.09
HOXC4-201ENST00000303406 DEFB136Q30KP8 78 aa14.5□□□□□ -0.09
HOXC4-201ENST00000303406 TDRG1Q3Y452 100 aa14.5□□□□□ -0.09
HOXC4-201ENST00000303406 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
HOXC4-201ENST00000303406 NXT2Q9NPJ8 142 aaKnown RBP14.5□□□□□ -0.09
HOXC4-201ENST00000303406 A8MTW9 85 aa14.49□□□□□ -0.09
HOXC4-201ENST00000303406 SMKR1H3BMG3 65 aa14.49□□□□□ -0.09
HOXC4-201ENST00000303406 TNFRSF6BO95407 300 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 NCR2O95944 276 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 EVI2AP22794 236 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 KIR3DS1Q14943 382 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 FAM159AQ6UWV7 190 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 SPATA12Q7Z6I5 190 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 PAM16Q9Y3D7 125 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 PDZD2O15018 2839 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 TEX15Q9BXT5 2789 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 NBPF19A0A087WUL8 3843 aa14.48□□□□□ -0.09
HOXC4-201ENST00000303406 LOC389332A0A1B0GUA5 103 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 RNASE3P12724 160 aaKnown RBP14.47□□□□□ -0.09
HOXC4-201ENST00000303406 FHL3Q13643 280 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 KHDC1LQ5JSQ8 128 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 MIEN1Q9BRT3 115 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 ZNF747Q9BV97 191 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 PHLDA3Q9Y5J5 127 aa14.47□□□□□ -0.09
HOXC4-201ENST00000303406 A0A096LNJ9 63 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 HBDP02042 147 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 CDKN1BP46527 198 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 LINC00173Q6ZV60 143 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 MRPL52Q86TS9 123 aaKnown RBP14.46□□□□□ -0.09
HOXC4-201ENST00000303406 OR2K2Q8NGT1 345 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 ZNF418Q8TF45 676 aaPredicted RBP14.46□□□□□ -0.09
HOXC4-201ENST00000303406 DLX4Q92988 240 aaPredicted RBP14.46□□□□□ -0.09
HOXC4-201ENST00000303406 DPH3P1Q9H4G8 78 aa14.46□□□□□ -0.09
HOXC4-201ENST00000303406 TRAV9-2A0A087WT02 112 aa14.46□□□□□ -0.1
HOXC4-201ENST00000303406 SPATA45Q537H7 98 aa14.46□□□□□ -0.1
HOXC4-201ENST00000303406 TRAV25A0A0B4J276 109 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 GNRH2O43555 120 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 HILS1P60008 231 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 AMTNQ6UX39 209 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 POM121L12Q8N7R1 296 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 Q8N8P6 123 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 NRACQ8N912 160 aa14.45□□□□□ -0.1
HOXC4-201ENST00000303406 MXRA5Q9NR99 2828 aa14.44□□□□□ -0.1
HOXC4-201ENST00000303406 M0R381 172 aa14.44□□□□□ -0.1
HOXC4-201ENST00000303406 LBHQ53QV2 105 aaPredicted RBP14.44□□□□□ -0.1
HOXC4-201ENST00000303406 LINC01545Q5VT33 79 aa14.44□□□□□ -0.1
HOXC4-201ENST00000303406 DYNLRB2Q8TF09 96 aa14.44□□□□□ -0.1
HOXC4-201ENST00000303406 AP1S3Q96PC3 154 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms