RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CDKN1BP46527 198 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 KIAA1644Q3SXP7 199 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 OR2K2Q8NGT1 345 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 C7orf71A4D174 169 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 Q6ZQT7 251 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 CNFNQ9BYD5 112 aa11.68□□□□□ -0.54
HERPUD1-201ENST00000300302 KNCNA6PVL3 124 aa11.67□□□□□ -0.54
HERPUD1-201ENST00000300302 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
HERPUD1-201ENST00000300302 KIR3DS1Q14943 382 aa11.67□□□□□ -0.54
HERPUD1-201ENST00000300302 TWIST1Q15672 202 aa11.67□□□□□ -0.54
HERPUD1-201ENST00000300302 C2CD3Q4AC94 2353 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 H3BMM0 161 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 IGLV1-51P01701 117 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 SRIP30626 198 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 NTF3P20783 257 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 S100A2P29034 98 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 SSTP61278 116 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 Q0VG73 95 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 OR10J3Q5JRS4 329 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 LINC00482Q8N8I6 264 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 C12orf57Q99622 126 aa11.66□□□□□ -0.54
HERPUD1-201ENST00000300302 TRAV12-3A0A0B4J271 114 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 MUC21A0A0G2JKD1 596 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 MUC21A0A140T8X8 626 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 A8MTW9 85 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 M0R2Z0 102 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 ASIPP42127 132 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 MUC21Q5SSG8 566 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 CITED1Q99966 193 aa11.65□□□□□ -0.54
HERPUD1-201ENST00000300302 LOC102724200A0A096LPH7 203 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 SNAI2O43623 268 aa11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 S100A4P26447 101 aaKnown RBP11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 PRIMA1Q86XR5 153 aa11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 BAGE3Q86Y29 109 aa11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 WNK1Q9H4A3 2382 aa11.64□□□□□ -0.55
HERPUD1-201ENST00000300302 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 ZNF324O75467 553 aaPredicted RBP11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 CACNG7P62955 275 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 H3BVH4 76 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 MED14OSP0DP75 135 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 ZNF124Q15973 351 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
HERPUD1-201ENST00000300302 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
HERPUD1-201ENST00000300302 SPANXN1Q5VSR9 72 aa11.62□□□□□ -0.55
HERPUD1-201ENST00000300302 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
HERPUD1-201ENST00000300302 TDRG1Q3Y452 100 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 SMIM15Q7Z3B0 74 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 IGHV4-4A0A075B6R2 117 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 FABP4P15090 132 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 PRR31Q5SQ13 230 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 FAM104BQ5XKR9 115 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 STHQ8IWL8 128 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 C18orf32Q8TCD1 76 aa11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 TIMM8BQ9Y5J9 83 aaPredicted RBP11.61□□□□□ -0.55
HERPUD1-201ENST00000300302 GNRH2O43555 120 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 AMBPP02760 352 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 INSL3P51460 131 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 MSRB1Q9NZV6 116 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 PHLDA3Q9Y5J5 127 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 SORL1Q92673 2214 aa11.6□□□□□ -0.55
HERPUD1-201ENST00000300302 NIPBLQ6KC79 2804 aaeCLIP11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 CD7P09564 240 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 FXYD7P58549 80 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 TMEM18Q96B42 140 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 AGRNO00468 2067 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 RBMY1BA6NDE4 496 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 RBMY1EA6NEQ0 496 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 SERF1AO75920 110 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 RBMY1DP0C7P1 496 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 ESDP10768 282 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
HERPUD1-201ENST00000300302 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-201ENST00000300302 LINC00310P59036 64 aa11.58□□□□□ -0.56
HERPUD1-201ENST00000300302 DMRTA1Q5VZB9 504 aa11.58□□□□□ -0.56
HERPUD1-201ENST00000300302 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-201ENST00000300302 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms