RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 DEFB131AP59861 70 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 PLXND1Q9Y4D7 1925 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 NDUFB1O75438 58 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 ZNF134P52741 427 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 G3V4G9 280 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 NDUFB8O95169 186 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 GNLYP22749 145 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 ZNF493Q6ZR52 646 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 LY6HO94772 140 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 VWC2Q2TAL6 325 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 ZNRF2Q8NHG8 242 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 NDUFA12Q9UI09 145 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 THSD7BQ9C0I4 1608 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 MLANAQ16655 118 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 DUX4L9Q6RFH8 374 aaPredicted RBP4.45□□□□□ -1.7
CPSF2-201ENST00000298875 NDUFA4L2Q9NRX3 87 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 A0A096LPF7 62 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 TRAV26-1A0A087WT03 109 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 GATA4P43694 442 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 MRPL35Q9NZE8 188 aaKnown RBP4.45□□□□□ -1.7
CPSF2-201ENST00000298875 V9GYV3 84 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 IGHV4-4A0A075B6R2 117 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV1-39P01597 117 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV1D-39P04432 117 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 Q6ZUT4 128 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 ARHGAP32A7KAX9 2087 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 SMIM27A0A1W2PRY6 76 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 WIPF3A6NGB9 483 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 ATP6V0E1O15342 81 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 CRIPAKQ8N1N5 446 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 CFC1P0CG37 223 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 CFHR4Q92496 578 aa4.45□□□□□ -1.7
CPSF2-201ENST00000298875 UBE2AP49459 152 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 K7ERS5 55 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 IGLC7A0M8Q6 106 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 MBD3L4A6NDZ8 208 aaPredicted RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 MBD3L3A6NE82 208 aaPredicted RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 MBD3L5A6NJ08 208 aaPredicted RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 HERVK_113P63121 156 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 MBD3L2Q8NHZ7 208 aaPredicted RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 IL17DQ8TAD2 202 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 TMEM14BQ9NUH8 114 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 NTN3O00634 580 aaPredicted RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 GATA3P23771 443 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 J3QQQ9 107 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 TEX36Q5VZQ5 186 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 SDK2Q58EX2 2172 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 TRBV19A0A075B6N1 114 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 FOXI1Q12951 378 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 PCNX2A6NKB5 2137 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 HERV-K104P63124 156 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 U3KQE9 123 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 PLXNA2O75051 1894 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 RPL18AQ02543 176 aaKnown RBP4.44□□□□□ -1.7
CPSF2-201ENST00000298875 Q6ZRM9 215 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 ZNF833PQ6ZTB9 187 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 IGLL5B9A064 214 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 IGLC1P0CG04 106 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 VWCEQ96DN2 955 aa4.44□□□□□ -1.7
CPSF2-201ENST00000298875 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 K7ENP7 123 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 MAPK1IP1LQ8NDC0 245 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 BPESC1Q9GZL8 116 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 ZFP36L1Q07352 338 aaKnown RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 MDS2Q8NDY4 140 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGHV1-69DA0A0B4J2H0 117 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 WFDC9Q8NEX5 89 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 RNF223E7ERA6 249 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 ANGP03950 147 aaKnown RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 C12orf74Q32Q52 190 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGF2BP2-AS1Q96M15 143 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 MST1LQ2TV78 715 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 MUSTN1Q8IVN3 82 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 C9JQL5 133 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 FNDC1Q4ZHG4 1894 aaPredicted RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 SPATA12Q7Z6I5 190 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 PRR25Q96S07 402 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 LENEPQ9Y5L5 61 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGKV2-29A2NJV5 120 aaPredicted RBP4.43□□□□□ -1.7
CPSF2-201ENST00000298875 IGLL1P15814 213 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 NAV3Q8IVL0 2385 aa4.43□□□□□ -1.7
CPSF2-201ENST00000298875 XCL1P47992 114 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 PLA2G2CQ5R387 149 aa4.42□□□□□ -1.7
CPSF2-201ENST00000298875 CD59P13987 128 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms