RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TWIST1Q15672 202 aa19.15■□□□□ 0.66
SDCCAG3-201ENST00000298537 AMN1Q8IY45 258 aa19.15■□□□□ 0.66
SDCCAG3-201ENST00000298537 TMEM61Q8N0U2 210 aa19.15■□□□□ 0.66
SDCCAG3-201ENST00000298537 BORCS7Q96B45 105 aa19.15■□□□□ 0.66
SDCCAG3-201ENST00000298537 ESDP10768 282 aa19.14■□□□□ 0.66
SDCCAG3-201ENST00000298537 URB1-AS1Q96HZ7 61 aa19.14■□□□□ 0.66
SDCCAG3-201ENST00000298537 ZNF124Q15973 351 aa19.14■□□□□ 0.65
SDCCAG3-201ENST00000298537 FAM19A2Q8N3H0 131 aa19.14■□□□□ 0.65
SDCCAG3-201ENST00000298537 RNF114Q9Y508 228 aa19.14■□□□□ 0.65
SDCCAG3-201ENST00000298537 SCGB2A2Q13296 93 aa19.13■□□□□ 0.65
SDCCAG3-201ENST00000298537 SNRPD3P62318 126 aaKnown RBP19.13■□□□□ 0.65
SDCCAG3-201ENST00000298537 GATD1Q8NB37 220 aa19.13■□□□□ 0.65
SDCCAG3-201ENST00000298537 OR10AG1Q8NH19 301 aa19.13■□□□□ 0.65
SDCCAG3-201ENST00000298537 TIMM8BQ9Y5J9 83 aaPredicted RBP19.12■□□□□ 0.65
SDCCAG3-201ENST00000298537 A0A0J9YX75 114 aa19.12■□□□□ 0.65
SDCCAG3-201ENST00000298537 PMCHP20382 165 aa19.12■□□□□ 0.65
SDCCAG3-201ENST00000298537 PEMTQ9UBM1 199 aa19.12■□□□□ 0.65
SDCCAG3-201ENST00000298537 CCL24O00175 119 aa19.11■□□□□ 0.65
SDCCAG3-201ENST00000298537 ZNF493Q6ZR52 646 aa19.11■□□□□ 0.65
SDCCAG3-201ENST00000298537 KCNS1Q96KK3 526 aa19.11■□□□□ 0.65
SDCCAG3-201ENST00000298537 FHL3Q13643 280 aa19.11■□□□□ 0.65
SDCCAG3-201ENST00000298537 Q6ZWC4 215 aa19.11■□□□□ 0.65
SDCCAG3-201ENST00000298537 TRAV12-2A0A075B6T6 113 aa19.1■□□□□ 0.65
SDCCAG3-201ENST00000298537 ANXA2RQ3ZCQ2 193 aa19.1■□□□□ 0.65
SDCCAG3-201ENST00000298537 SAMD10Q9BYL1 202 aa19.1■□□□□ 0.65
SDCCAG3-201ENST00000298537 H3BVH4 76 aa19.09■□□□□ 0.65
SDCCAG3-201ENST00000298537 M0R2Z0 102 aa19.09■□□□□ 0.65
SDCCAG3-201ENST00000298537 APRG1Q8IVJ8 170 aa19.09■□□□□ 0.65
SDCCAG3-201ENST00000298537 TRAV21A0A0B4J279 112 aa19.09■□□□□ 0.65
SDCCAG3-201ENST00000298537 A0A1B0GW15 77 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 KNCNA6PVL3 124 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 KLLNB2CW77 178 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 SMKR1H3BMG3 65 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 GNRH2O43555 120 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 CD300EQ496F6 205 aaPredicted RBP19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 SAMD13Q5VXD3 122 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 RNASEKQ6P5S7 137 aaKnown RBP19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 CNFNQ9BYD5 112 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 C2CD3Q4AC94 2353 aa19.08■□□□□ 0.65
SDCCAG3-201ENST00000298537 GAS8-AS1O95177 125 aa19.08■□□□□ 0.64
SDCCAG3-201ENST00000298537 KRTAP10-3P60369 221 aa19.08■□□□□ 0.64
SDCCAG3-201ENST00000298537 FAM104BQ5XKR9 115 aa19.08■□□□□ 0.64
SDCCAG3-201ENST00000298537 NIT1Q86X76 327 aa19.08■□□□□ 0.64
SDCCAG3-201ENST00000298537 TSSC4Q9Y5U2 329 aaPredicted RBP19.08■□□□□ 0.64
SDCCAG3-201ENST00000298537 BTF3P20290 206 aaKnown RBP19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 AMTP48728 403 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 PROK1P58294 105 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 JOSD1Q15040 202 aaPredicted RBP19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 PMCHL1Q16048 86 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 DEFB114Q30KQ6 69 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 DEFB131AP59861 70 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 DYNLRB2Q8TF09 96 aa19.07■□□□□ 0.64
SDCCAG3-201ENST00000298537 TRAV12-3A0A0B4J271 114 aa19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 D6R8Y8 96 aa19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 PAFAH1B2P68402 229 aa19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 MRPL51Q4U2R6 128 aaKnown RBP19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 ADARB2-AS1A8MUL3 147 aa19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 ZNF324O75467 553 aaPredicted RBP19.06■□□□□ 0.64
SDCCAG3-201ENST00000298537 NCR2O95944 276 aa19.05■□□□□ 0.64
SDCCAG3-201ENST00000298537 SPINK13Q1W4C9 94 aa19.05■□□□□ 0.64
SDCCAG3-201ENST00000298537 FXYD7P58549 80 aa19.05■□□□□ 0.64
SDCCAG3-201ENST00000298537 EBLN2Q6P2I7 272 aa19.05■□□□□ 0.64
SDCCAG3-201ENST00000298537 RNF185Q96GF1 192 aa19.05■□□□□ 0.64
SDCCAG3-201ENST00000298537 NSUN5P1Q3KNT7 163 aa19.04■□□□□ 0.64
SDCCAG3-201ENST00000298537 EVI2AP22794 236 aa19.03■□□□□ 0.64
SDCCAG3-201ENST00000298537 NDUFA7O95182 113 aa19.03■□□□□ 0.64
SDCCAG3-201ENST00000298537 TRBV7-9A0A0J9YWB2 115 aa19.02■□□□□ 0.64
SDCCAG3-201ENST00000298537 SNAI2O43623 268 aa19.02■□□□□ 0.64
SDCCAG3-201ENST00000298537 TMEM191AQ9H0A3 160 aa19.02■□□□□ 0.64
SDCCAG3-201ENST00000298537 AMTNQ6UX39 209 aa19.01■□□□□ 0.63
SDCCAG3-201ENST00000298537 OR5AL1P0C617 328 aa19.01■□□□□ 0.63
SDCCAG3-201ENST00000298537 FOXI2Q6ZQN5 318 aa19.01■□□□□ 0.63
SDCCAG3-201ENST00000298537 HSBP1O75506 76 aa19■□□□□ 0.63
SDCCAG3-201ENST00000298537 RAB4AP20338 218 aa19■□□□□ 0.63
SDCCAG3-201ENST00000298537 RNASE3P12724 160 aaKnown RBP19■□□□□ 0.63
SDCCAG3-201ENST00000298537 GATA1P15976 413 aaPredicted RBP19■□□□□ 0.63
SDCCAG3-201ENST00000298537 DEFA6Q01524 100 aa19■□□□□ 0.63
SDCCAG3-201ENST00000298537 ZNF256Q9Y2P7 627 aaPredicted RBP19■□□□□ 0.63
SDCCAG3-201ENST00000298537 LOC389332A0A1B0GUA5 103 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 RBMY1BA6NDE4 496 aaKnown RBP18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 RBMY1EA6NEQ0 496 aaKnown RBP18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 M0R381 172 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 RBMY1DP0C7P1 496 aaKnown RBP18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 SPANXN1Q5VSR9 72 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 JMJD8Q96S16 334 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 U3KQK5 164 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 C7orf71A4D174 169 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 S100A4P26447 101 aaKnown RBP18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 PRELID3AQ96N28 172 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 MAP6D1Q9H9H5 199 aa18.99■□□□□ 0.63
SDCCAG3-201ENST00000298537 A0A1B0GV90 55 aa18.98■□□□□ 0.63
SDCCAG3-201ENST00000298537 SCGB1D1O95968 90 aa18.98■□□□□ 0.63
SDCCAG3-201ENST00000298537 TCF21O43680 179 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 NPYP01303 97 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 ASIPP42127 132 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 TENM1Q9UKZ4 2725 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 F8P00451 2351 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 MUC4Q99102 2169 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 JMJD1CQ15652 2540 aa18.97■□□□□ 0.63
SDCCAG3-201ENST00000298537 LINC00614P0C842 121 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms