RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NFE4Q86UQ8 179 aa12.39□□□□□ -0.43
MAP1LC3B-201ENST00000268607 HES1Q14469 280 aa12.39□□□□□ -0.43
MAP1LC3B-201ENST00000268607 S4R3C0 116 aa12.39□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PRRC2AP48634 2157 aaKnown RBP12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 TEX22C9J3V5 150 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ODF1Q14990 250 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 TWIST1Q15672 202 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 MAPK1IP1LQ8NDC0 245 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 RASL11BQ9BPW5 248 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 GAS8-AS1O95177 125 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PRSS1P07477 247 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 FCER1GP30273 86 aa12.38□□□□□ -0.43
MAP1LC3B-201ENST00000268607 B5MCH6 92 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ANAPC13Q9BS18 74 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 CREBBPQ92793 2442 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SH2D1AO60880 128 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 LEPP41159 167 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 EFNA4P52798 201 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 RRN3P1Q2M238 152 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 MAPKAPK5-AS1Q8N8E1 139 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PIFOQ8TCI5 191 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 C1QTNF4Q9BXJ3 329 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
MAP1LC3B-201ENST00000268607 IGKCP01834 107 aa12.36□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ATP5J2P56134 94 aa12.36□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ZMAT4Q9H898 229 aa12.36□□□□□ -0.43
MAP1LC3B-201ENST00000268607 IGKV1-17P01599 117 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 GAGE5Q13069 117 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 GAGE6Q13070 117 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SRSF8Q9BRL6 282 aaKnown RBP12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 UFC1Q9Y3C8 167 aa12.35□□□□□ -0.43
MAP1LC3B-201ENST00000268607 COX6B1P14854 86 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 FOXC2Q99958 501 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PRSS29PA6NIE9 313 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PTH2Q96A98 100 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 H3BRN7 92 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 I3L2K1 104 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 EVI2AP22794 236 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 HERV-K104P63124 156 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
MAP1LC3B-201ENST00000268607 FLNAP21333 2647 aaKnown RBP12.33□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 VMO1Q7Z5L0 202 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 OR11H6Q8NGC7 330 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 CFHR4Q92496 578 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TMEM160Q9NX00 188 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 CUBNO60494 3623 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGHV3OR16-10A0A075B7F0 116 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGKV2-40A0A087WW87 121 aaPredicted RBP12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGKV2D-40P01614 121 aaPredicted RBP12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PRTN3P24158 256 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGHV4-30-2A0A087WSY4 118 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 NBR2O15453 112 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IL4P05112 153 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TRAV40A0A0B4J280 105 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 RNF185Q96GF1 192 aa12.32□□□□□ -0.44
MAP1LC3B-201ENST00000268607 MRPS12O15235 138 aaKnown RBP12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 DPM2O94777 84 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 GATA1P15976 413 aaPredicted RBP12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TRBV7-9A0A0J9YWB2 115 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 Q8TAT8 98 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TMEM158Q8WZ71 300 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
MAP1LC3B-201ENST00000268607 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
MAP1LC3B-201ENST00000268607 RNF125Q96EQ8 232 aa12.3□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
MAP1LC3B-201ENST00000268607 LMO4P61968 165 aa12.3□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PSMG4Q5JS54 123 aa12.3□□□□□ -0.44
MAP1LC3B-201ENST00000268607 NF1P21359 2839 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ODF3BA8MYP8 253 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 M0R1W7 72 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PDZD2O15018 2839 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 K7EIM0 57 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGHV3-23P01764 117 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 CARD19Q96LW7 228 aa12.29□□□□□ -0.44
MAP1LC3B-201ENST00000268607 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms