RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 UBE2L6O14933 153 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 SRSF2Q01130 221 aaKnown RBP7.29□□□□□ -1.24
SRSF6-201ENST00000244020 LYPD2Q6UXB3 125 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 DUX5Q96PT3 197 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 SIGLEC15Q6ZMC9 328 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 ZNF493Q6ZR52 646 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 ANKRD29Q8N6D5 301 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 IGKV2D-26A0A0A0MRZ7 120 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 IGLL5B9A064 214 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 PIP4P2Q8N4L2 257 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 TEX36Q5VZQ5 186 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 DEFB123Q8N688 67 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 TNFRSF18Q9Y5U5 241 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 C17orf100A8MU93 164 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 ID1P41134 155 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 SYNJ2BPP57105 145 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 DEFB109BQ30KR1 87 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 FOXI2Q6ZQN5 318 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 BRK1Q8WUW1 75 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 SPXQ9BT56 116 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 DKK4Q9UBT3 224 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 IGKV1-17P01599 117 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 IGHV1-8P0DP01 117 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 FOXI1Q12951 378 aa7.28□□□□□ -1.24
SRSF6-201ENST00000244020 FAM208BQ5VWN6 2430 aa7.27□□□□□ -1.24
SRSF6-201ENST00000244020 DMDP11532 3685 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 CD28P10747 220 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 ASCL5Q7RTU5 278 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 PRADC1Q9BSG0 188 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 MSRB1Q9NZV6 116 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 CUL9Q8IWT3 2517 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
SRSF6-201ENST00000244020 RNASE4P34096 147 aaKnown RBP7.27□□□□□ -1.25
SRSF6-201ENST00000244020 K7EM74 188 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 EFNA4P52798 201 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
SRSF6-201ENST00000244020 TRBV6-1A0A0K0K1D8 114 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 TIMM23O14925 209 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 H3BRN7 92 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 ODF1Q14990 250 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 LINC00311Q8N616 119 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 ZNF491Q8N8L2 437 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 IGHV1-3A0A0C4DH29 117 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 TMEM178BH3BS89 294 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 HAMPP81172 84 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 U3KQK5 164 aa7.26□□□□□ -1.25
SRSF6-201ENST00000244020 ZFHX2Q9C0A1 2572 aaPredicted RBP7.26□□□□□ -1.25
SRSF6-201ENST00000244020 TINCRA0A1B0GVN0 87 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 NPFFO15130 113 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 KLRD1Q13241 179 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 PRR25Q96S07 402 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 I3L2K1 104 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 ZNF883P0CG24 379 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 GATA1P15976 413 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 WT1P19544 449 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 NDPQ00604 133 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 SPANXB1Q9NS25 103 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 PTPN13Q12923 2485 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MBD3L4A6NDZ8 208 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MBD3L3A6NE82 208 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MBD3L5A6NJ08 208 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MORN3Q6PF18 240 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 MBD3L2Q8NHZ7 208 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 LAMTOR3Q9UHA4 124 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 RAI1Q7Z5J4 1906 aaPredicted RBP7.25□□□□□ -1.25
SRSF6-201ENST00000244020 M0QXV9 152 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 PAX4O43316 350 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 LINC00158P58513 81 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 Q6ZUT4 128 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 IL17RELQ6ZVW7 336 aa7.25□□□□□ -1.25
SRSF6-201ENST00000244020 ADARB2-AS1A8MUL3 147 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 CD7P09564 240 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 LOXP28300 417 aaPredicted RBP7.24□□□□□ -1.25
SRSF6-201ENST00000244020 WI2-2373I1.2A0A1W2PRP0 233 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 TEX22C9J3V5 150 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 CD59P13987 128 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 HOXB4P17483 251 aaPredicted RBP7.24□□□□□ -1.25
SRSF6-201ENST00000244020 TRAV41A0A0B4J266 112 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 A0A1B0GX51 115 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 RPL32P62910 135 aaKnown RBP7.24□□□□□ -1.25
SRSF6-201ENST00000244020 C22orf34Q6ZV56 151 aa7.24□□□□□ -1.25
SRSF6-201ENST00000244020 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms