RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 PRR27Q6MZM9 219 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 UQCC3Q6UW78 93 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 ZNF493Q6ZR52 646 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 IGKV3D-20A0A0C4DH25 116 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 KRBOX1C9JBD0 128 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 K7EN84 100 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 SFTA3P0C7M3 94 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 RNASE8Q8TDE3 154 aaKnown RBP7.3□□□□□ -1.24
HMGCL-201ENST00000235958 TMEM263Q8WUH6 116 aaKnown RBP7.3□□□□□ -1.24
HMGCL-201ENST00000235958 DAZAP1Q96EP5 407 aaKnown RBP7.3□□□□□ -1.24
HMGCL-201ENST00000235958 KCNS1Q96KK3 526 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 BIN3Q9NQY0 253 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 GSN-AS1Q9NRJ2 163 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 MDFICQ9P1T7 246 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 LY96Q9Y6Y9 160 aa7.3□□□□□ -1.24
HMGCL-201ENST00000235958 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 TMEM189A5PLL7 270 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 B4DEV8 164 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 M0R036 132 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 NUDT10Q8NFP7 164 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 NUDT11Q96G61 164 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 C16orf74Q96GX8 76 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 SDF2L1Q9HCN8 221 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 MUC4Q99102 2169 aa7.29□□□□□ -1.24
HMGCL-201ENST00000235958 TMSB15BA0A087X1C1 80 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 TMEM218A2RU14 115 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 C19orf71A6NCJ1 209 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 TYMSP04818 313 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
HMGCL-201ENST00000235958 RNASE7Q9H1E1 156 aaKnown RBP7.28□□□□□ -1.24
HMGCL-201ENST00000235958 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
HMGCL-201ENST00000235958 NOP10Q9NPE3 64 aaKnown RBP7.28□□□□□ -1.24
HMGCL-201ENST00000235958 TIMM8BQ9Y5J9 83 aaPredicted RBP7.28□□□□□ -1.24
HMGCL-201ENST00000235958 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 GRIFINA4D1Z8 144 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 SNURFLB1AK76 121 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 P01737 135 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 RPL23P62829 140 aaKnown RBP7.27□□□□□ -1.25
HMGCL-201ENST00000235958 RPL19P84098 196 aaKnown RBP7.27□□□□□ -1.25
HMGCL-201ENST00000235958 IBA57Q5T440 356 aaKnown RBP7.27□□□□□ -1.25
HMGCL-201ENST00000235958 EDA2RQ9HAV5 297 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 DKK2Q9UBU2 259 aa7.27□□□□□ -1.25
HMGCL-201ENST00000235958 NACAE9PAV3 2078 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 CXorf65A6NEN9 183 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 RNASE3P12724 160 aaKnown RBP7.26□□□□□ -1.25
HMGCL-201ENST00000235958 TCL1AP56279 114 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 ERVFC1-1P60608 527 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 ZNF415Q09FC8 603 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
HMGCL-201ENST00000235958 ADIRFQ15847 76 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 DNLZQ5SXM8 178 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 FAM222AQ5U5X8 452 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 OR2D3Q8NGH3 330 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 SPXQ9BT56 116 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 CELA1Q9UNI1 258 aa7.26□□□□□ -1.25
HMGCL-201ENST00000235958 LYRM9A8MSI8 78 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 F8W036 122 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 GATCO43716 136 aaKnown RBP7.25□□□□□ -1.25
HMGCL-201ENST00000235958 ARMS2P0C7Q2 107 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 DEFB130BP0DP73 79 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 DEFB130AP0DP74 79 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 GZMBP10144 247 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 S100A4P26447 101 aaKnown RBP7.25□□□□□ -1.25
HMGCL-201ENST00000235958 ASIPP42127 132 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 FAM231DQ6ZW35 169 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 C11orf45Q8TAV5 145 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 SEC11CQ9BY50 192 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 OSTCQ9NRP0 149 aa7.25□□□□□ -1.25
HMGCL-201ENST00000235958 SPINK4O60575 86 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 ADCYAP1P18509 176 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 NANOS2P60321 138 aaKnown RBP7.24□□□□□ -1.25
HMGCL-201ENST00000235958 RPS20P60866 119 aaKnown RBP7.24□□□□□ -1.25
HMGCL-201ENST00000235958 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 LGALS9BQ3B8N2 356 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 Q6ZTI0 123 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 SFRP2Q96HF1 295 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 C9orf85Q96MD7 179 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 RPP21Q9H633 154 aaKnown RBP7.24□□□□□ -1.25
HMGCL-201ENST00000235958 IL36BQ9NZH7 164 aa7.24□□□□□ -1.25
HMGCL-201ENST00000235958 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 GAGE12BA1L429 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 XKRY2A2RUG3 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 H3BVH4 76 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 M0R2P5 195 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 GAGE7O76087 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 CXCL1P09341 107 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 GAGE12FP0CL80 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 GAGE12GP0CL81 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 GAGE12IP0CL82 117 aa7.23□□□□□ -1.25
HMGCL-201ENST00000235958 DAD1P61803 113 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms