RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MST1LQ2TV78 715 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 DYNAPQ8N1N2 210 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 LY6HO94772 140 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 SLC25A29Q8N8R3 303 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 NTN3O00634 580 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 MAPK1IP1LQ8NDC0 245 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 CUL9Q8IWT3 2517 aa11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 IGLV3-21P80748 117 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 BPESC1Q9GZL8 116 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 UBE2E1P51965 193 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 LGALS9BQ3B8N2 356 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 IGKV2-29A2NJV5 120 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-201ENST00000216484 CCL25O15444 150 aa11.72□□□□□ -0.53
SPTLC2-201ENST00000216484 NPYP01303 97 aa11.72□□□□□ -0.53
SPTLC2-201ENST00000216484 TRAV4A0A0B4J268 109 aa11.72□□□□□ -0.53
SPTLC2-201ENST00000216484 SPACA3Q8IXA5 215 aa11.72□□□□□ -0.53
SPTLC2-201ENST00000216484 PRSS47A8MTI9 375 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 IGLV10-54A0A075B6I4 117 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 ATP6V0E1O15342 81 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 NDUFB8O95169 186 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 IGLL1P15814 213 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 SRSF2Q01130 221 aaKnown RBP11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.53
SPTLC2-201ENST00000216484 RNF223E7ERA6 249 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 DKK2Q9UBU2 259 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 IGKV1-27A0A075B6S5 117 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 C5orf38Q86SI9 138 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 ALPK3Q96L96 1907 aa11.71□□□□□ -0.54
SPTLC2-201ENST00000216484 ASPHD1Q5U4P2 390 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 Q6ZWC4 215 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 A0A0G2JNJ9 132 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 LINC00114Q6XXX2 140 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 Q9UFV3 132 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 H3BQ85 93 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 HIST2H2BCQ6DN03 193 aa11.7□□□□□ -0.54
SPTLC2-201ENST00000216484 IGKV1-12A0A0C4DH73 117 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 IGKV1D-12P01611 117 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 GNLYP22749 145 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 CFPP27918 469 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 DUX4L9Q6RFH8 374 aaPredicted RBP11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 GAFA1Q96PS6 74 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 HERV-K104P63124 156 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 CFC1BP0CG36 223 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 CFC1P0CG37 223 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
SPTLC2-201ENST00000216484 CFHR1Q03591 330 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 TM2D2Q9BX73 214 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 RHOHQ15669 191 aa11.68□□□□□ -0.54
SPTLC2-201ENST00000216484 NDUFS7O75251 213 aa11.67□□□□□ -0.54
SPTLC2-201ENST00000216484 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
SPTLC2-201ENST00000216484 COL8A2P25067 703 aa11.67□□□□□ -0.54
SPTLC2-201ENST00000216484 NHSL1Q5SYE7 1610 aa11.67□□□□□ -0.54
SPTLC2-201ENST00000216484 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 NOTCH4Q99466 2003 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 Q96MF0 132 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 K7EMI3 77 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 ZNF492Q9P255 531 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 SIVA1O15304 175 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 PRR15LQ9BU68 103 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 MLST8Q9BVC4 326 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 NCR3O14931 201 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 MSMBP08118 114 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 ZNF883P0CG24 379 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 LYL1P12980 280 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 ZC2HC1AQ96GY0 325 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 GFI1Q99684 422 aa11.66□□□□□ -0.54
SPTLC2-201ENST00000216484 KIAA1671Q9BY89 1806 aa11.65□□□□□ -0.54
SPTLC2-201ENST00000216484 WDR86Q86TI4 376 aa11.65□□□□□ -0.54
SPTLC2-201ENST00000216484 LHFPL1Q86WI0 220 aa11.65□□□□□ -0.54
SPTLC2-201ENST00000216484 COX7A2LO14548 114 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms