RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 MITD1Q8WV92 249 aa10.49□□□□□ -0.73
PDLIM3-213ENST00000629667 GPN1Q9HCN4 374 aaPredicted RBP10.49□□□□□ -0.73
PDLIM3-213ENST00000629667 IGHV3-38A0A0C4DH36 116 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 FAM24AA6NFZ4 105 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 CCSO14618 274 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 ZNF138P52744 262 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 RASL10AQ92737 203 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 DNAH8Q96JB1 4490 aa10.48□□□□□ -0.73
PDLIM3-213ENST00000629667 KRTAP29-1A8MX34 341 aaPredicted RBP10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 SPANXN2Q5MJ10 180 aa10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 Q8TAT8 98 aa10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 SPXQ9BT56 116 aa10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 SLC25A31Q9H0C2 315 aa10.47□□□□□ -0.73
PDLIM3-213ENST00000629667 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 CENPXA8MT69 81 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 C1QBP02746 253 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 FGF7P21781 194 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 S100A11P31949 105 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 PPT1P50897 306 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 BAK1Q16611 211 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 SH2D6Q7Z4S9 175 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 CHAC2Q8WUX2 184 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 SLC25A2Q9BXI2 301 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 Q9HAA7 133 aa10.46□□□□□ -0.73
PDLIM3-213ENST00000629667 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 TRAV4A0A0B4J268 109 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 NBEAP1P0C6P0 100 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 SULT1A1P50225 295 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 HBG1P69891 147 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 HBG2P69892 147 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 ZNF266Q14584 549 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 TMEM183BQ1AE95 376 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 OR4C5Q8NGB2 326 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 DEFB104AQ8WTQ1 72 aa10.45□□□□□ -0.74
PDLIM3-213ENST00000629667 LOC100131303A0A0U1RQF7 123 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 GCSAMLQ5JQS6 135 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 STX12Q86Y82 276 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 C11orf1Q9H5F2 150 aa10.44□□□□□ -0.74
PDLIM3-213ENST00000629667 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 BTCP35070 178 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 CSN1S1P47710 185 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 TIRAPP58753 221 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 CNPY1Q3B7I2 92 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 MIR17HGQ75NE6 70 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 TMEM252Q8N6L7 170 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 FAM167A-AS1Q96KT0 104 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 LYRM2Q9NU23 88 aaPredicted RBP10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 BOLA1Q9Y3E2 137 aa10.43□□□□□ -0.74
PDLIM3-213ENST00000629667 IGSF23A1L1A6 192 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 OR10J4P0C629 311 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 S100A10P60903 97 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 OR10J3Q5JRS4 329 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 Q6AWC8 147 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 NPCDR1Q9BY65 106 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 NAGKQ9UJ70 344 aa10.42□□□□□ -0.74
PDLIM3-213ENST00000629667 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 M0R2P5 195 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 PHYHIPLQ96FC7 376 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 C2orf50Q96LR7 162 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 PAXXQ9BUH6 204 aa10.41□□□□□ -0.74
PDLIM3-213ENST00000629667 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 PFN1P07737 140 aaKnown RBP10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 RANP62826 216 aaKnown RBP10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 FXYD5Q96DB9 178 aa10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.74
PDLIM3-213ENST00000629667 GATA1P15976 413 aaPredicted RBP10.39□□□□□ -0.75
PDLIM3-213ENST00000629667 Q6ZSA8 131 aa10.39□□□□□ -0.75
PDLIM3-213ENST00000629667 GNRH2O43555 120 aa10.38□□□□□ -0.75
PDLIM3-213ENST00000629667 OR7C2O60412 319 aa10.38□□□□□ -0.75
PDLIM3-213ENST00000629667 RAB32Q13637 225 aa10.38□□□□□ -0.75
PDLIM3-213ENST00000629667 TDRG1Q3Y452 100 aa10.38□□□□□ -0.75
PDLIM3-213ENST00000629667 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
PDLIM3-213ENST00000629667 FBLL1A6NHQ2 334 aaKnown RBP10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 LAGE3Q14657 143 aa10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 LELP1Q5T871 98 aa10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 SDHCQ99643 169 aaPredicted RBP10.37□□□□□ -0.75
PDLIM3-213ENST00000629667 SEC22CQ9BRL7 303 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms