RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 IGFL3Q6UXB1 125 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 Q8TCH9 128 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 A0A0J9YY99 117 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 NDUFS5O43920 106 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
SHPRH-211ENST00000629427 FOXL2NBQ6ZUU3 175 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 ZNF134P52741 427 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 C2orf66Q6UXQ4 117 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 TPSG1Q9NRR2 321 aa9.37□□□□□ -0.91
SHPRH-211ENST00000629427 IGLV2-23P01705 113 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
SHPRH-211ENST00000629427 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 LMO1P25800 156 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
SHPRH-211ENST00000629427 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 Q6ZR03 302 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 KIAA1549LQ6ZVL6 1849 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 DSCAML1Q8TD84 2053 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 ATP6V0BQ99437 205 aa9.36□□□□□ -0.91
SHPRH-211ENST00000629427 DSCAMO60469 2012 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 XCL1P47992 114 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 Q8N8P6 123 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 IGHV7-4-1A0A0J9YVY3 117 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 SPINK8P0C7L1 97 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 LOXP28300 417 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-211ENST00000629427 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 IGKV1-6A0A0C4DH72 117 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-211ENST00000629427 DEFB136Q30KP8 78 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 ADAMTSL5Q6ZMM2 481 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 CYYR1Q96J86 154 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 SLAQ13239 276 aa9.35□□□□□ -0.91
SHPRH-211ENST00000629427 HAMPP81172 84 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 DEFB112Q30KQ8 113 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 A0A1B0GUS0 222 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 Q6ZQT7 251 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 WNK1Q9H4A3 2382 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 H3BRN7 92 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 ZNF492Q9P255 531 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 PLXNB1O43157 2135 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 PRB1P04280 392 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 WDR86Q86TI4 376 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 COX11Q9Y6N1 276 aa9.34□□□□□ -0.91
SHPRH-211ENST00000629427 LYL1P12980 280 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
SHPRH-211ENST00000629427 PRR25Q96S07 402 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 UBL5Q9BZL1 73 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
SHPRH-211ENST00000629427 DIAPH2-AS1Q14236 149 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 PRSS57Q6UWY2 283 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 CRLF1O75462 422 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 ELANEP08246 267 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 PROK2Q9HC23 129 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 LY6G6EA0A0G2JKS1 128 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 U3KQA8 63 aa9.33□□□□□ -0.92
SHPRH-211ENST00000629427 BUB3O43684 328 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 DEFB113Q30KQ7 82 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 U3KQE9 123 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 IGHV2-5P01817 119 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 PLA2G2CQ5R387 149 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 HERVK_113P63121 156 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 FGF6P10767 208 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
SHPRH-211ENST00000629427 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 ZNF503-AS2A6NEH8 195 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 NDUFA12Q9UI09 145 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 HCFC1P51610 2035 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 RHOHQ15669 191 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 NDUFS7O75251 213 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 ASPHD1Q5U4P2 390 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 IGHG4P01861 327 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 LINC00311Q8N616 119 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 CFHR4Q92496 578 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 IGLV1-44P01699 117 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 ZC2HC1AQ96GY0 325 aa9.31□□□□□ -0.92
SHPRH-211ENST00000629427 PRSS33Q8NF86 280 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 PCNX3Q9H6A9 2034 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 WT1-ASQ06250 92 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 TNRC6BQ9UPQ9 1833 aaKnown RBP9.3□□□□□ -0.92
SHPRH-211ENST00000629427 GNRH2O43555 120 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 SLURP1P55000 103 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 SRSF2Q01130 221 aaKnown RBP9.3□□□□□ -0.92
SHPRH-211ENST00000629427 CT83Q5H943 113 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 FAM231BA6NCW3 169 aa9.3□□□□□ -0.92
SHPRH-211ENST00000629427 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms