RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
CIRBP-245ENST00000621399 FLI1Q01543 452 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-245ENST00000621399 PRNTQ86SH4 94 aa13.36□□□□□ -0.27
CIRBP-245ENST00000621399 MANBALQ9NQG1 85 aa13.36□□□□□ -0.27
CIRBP-245ENST00000621399 DNAH7Q8WXX0 4024 aa13.36□□□□□ -0.27
CIRBP-245ENST00000621399 TRAV34A0A0B4J273 112 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 IGLV2-11P01706 119 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 AZU1P20160 251 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 TVP23CQ96ET8 276 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 PYGO2Q9BRQ0 406 aa13.35□□□□□ -0.27
CIRBP-245ENST00000621399 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
CIRBP-245ENST00000621399 CXorf65A6NEN9 183 aa13.34□□□□□ -0.27
CIRBP-245ENST00000621399 IFNA1P01562 189 aa13.34□□□□□ -0.27
CIRBP-245ENST00000621399 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
CIRBP-245ENST00000621399 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
CIRBP-245ENST00000621399 SAPCD1Q5SSQ6 148 aa13.33□□□□□ -0.28
CIRBP-245ENST00000621399 ZFAND6Q6FIF0 208 aa13.33□□□□□ -0.28
CIRBP-245ENST00000621399 Q6ZQT7 251 aa13.33□□□□□ -0.28
CIRBP-245ENST00000621399 RGS13O14921 159 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 AKR1C3P42330 323 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 UBE2G1P62253 170 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 ZNF493Q6ZR52 646 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 C16orf74Q96GX8 76 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 FMC1Q96HJ9 113 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
CIRBP-245ENST00000621399 SCO2A0A1W2PP80 73 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 CBY3A6NI87 242 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 Q6AWC8 147 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 EIF4E3Q8N5X7 224 aaKnown RBP13.31□□□□□ -0.28
CIRBP-245ENST00000621399 TMEM263Q8WUH6 116 aaKnown RBP13.31□□□□□ -0.28
CIRBP-245ENST00000621399 C8orf49Q96NF6 230 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 LINC00467Q9BRT7 94 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 KLF12Q9Y4X4 402 aa13.31□□□□□ -0.28
CIRBP-245ENST00000621399 IGHV1OR15-1A0A075B7D0 117 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 TRAV21A0A0B4J279 112 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 SMUG1Q53HV7 270 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 TEX261Q6UWH6 196 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 Q86TA4 180 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 RNASE8Q8TDE3 154 aaKnown RBP13.3□□□□□ -0.28
CIRBP-245ENST00000621399 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 DKK2Q9UBU2 259 aa13.3□□□□□ -0.28
CIRBP-245ENST00000621399 TEX48A0A1B0GUV7 120 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 GCGP01275 180 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 BCL2P10415 239 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 TMEM183BQ1AE95 376 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 MUC21Q5SSG8 566 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
CIRBP-245ENST00000621399 S100A9P06702 114 aaKnown RBP13.28□□□□□ -0.28
CIRBP-245ENST00000621399 TAGLN2P37802 199 aaKnown RBP13.28□□□□□ -0.28
CIRBP-245ENST00000621399 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-245ENST00000621399 ANXA2RQ3ZCQ2 193 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 CASC10Q5T4H9 136 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 FAM159AQ6UWV7 190 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 ZNF767PQ75MW2 155 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 ZNF680Q8NEM1 530 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 LYPD6BQ8NI32 183 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 C2CD4CQ8TF44 421 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 NAGKQ9UJ70 344 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 ZFP30Q9Y2G7 519 aa13.28□□□□□ -0.28
CIRBP-245ENST00000621399 TIMM8BQ9Y5J9 83 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-245ENST00000621399 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
CIRBP-245ENST00000621399 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
CIRBP-245ENST00000621399 SNURFLB1AK76 121 aa13.27□□□□□ -0.29
CIRBP-245ENST00000621399 ZNF80P51504 273 aaPredicted RBP13.27□□□□□ -0.29
CIRBP-245ENST00000621399 C12orf74Q32Q52 190 aa13.27□□□□□ -0.29
CIRBP-245ENST00000621399 PHLDA1Q8WV24 401 aaPredicted RBP13.27□□□□□ -0.29
CIRBP-245ENST00000621399 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
CIRBP-245ENST00000621399 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
CIRBP-245ENST00000621399 PDE6DO43924 150 aa13.26□□□□□ -0.29
CIRBP-245ENST00000621399 Q6ZTC4 211 aa13.26□□□□□ -0.29
CIRBP-245ENST00000621399 LTAP01374 205 aa13.25□□□□□ -0.29
CIRBP-245ENST00000621399 PFN1P07737 140 aaKnown RBP13.25□□□□□ -0.29
CIRBP-245ENST00000621399 C11orf52Q96A22 123 aa13.25□□□□□ -0.29
CIRBP-245ENST00000621399 GSN-AS1Q9NRJ2 163 aa13.25□□□□□ -0.29
CIRBP-245ENST00000621399 NUPR2A6NF83 97 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 RBFOX3A6NFN3 312 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 DEFB130BP0DP73 79 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 DEFB130AP0DP74 79 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 RPL35P42766 123 aaKnown RBP13.24□□□□□ -0.29
CIRBP-245ENST00000621399 DAD1P61803 113 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 CEMP1Q6PRD7 247 aaPredicted RBP13.24□□□□□ -0.29
CIRBP-245ENST00000621399 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 RYR3Q15413 4870 aa13.24□□□□□ -0.29
CIRBP-245ENST00000621399 TRGV11A0A075B6L2 103 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 FABP5P3A8MUU1 101 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 TDRG1Q3Y452 100 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 IBA57Q5T440 356 aaKnown RBP13.23□□□□□ -0.29
CIRBP-245ENST00000621399 COX8CQ7Z4L0 72 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 TMEM183AQ8IXX5 376 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
CIRBP-245ENST00000621399 ZC2HC1AQ96GY0 325 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms