RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF562Q6V9R5 426 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 COX8CQ7Z4L0 72 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 AKAP9Q99996 3911 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 IGKCP01834 107 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 FCER1GP30273 86 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 CKS2P33552 79 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 KRTAP1-3Q8IUG1 177 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 KLF17Q5JT82 389 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 SIGLEC15Q6ZMC9 328 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 LCNL1Q6ZST4 164 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 Q96MF0 132 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 TPPP3Q9BW30 176 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 MAP1LC3AQ9H492 121 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 SETXQ7Z333 2677 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 IGKV2D-26A0A0A0MRZ7 120 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 IGHV4-61A0A0C4DH41 118 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 K7ERJ3 54 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 TCTAP57738 103 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 LYZP61626 148 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 GAGE13Q4V321 117 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 RUSC1-AS1Q66K80 236 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 TTC9CQ8N5M4 171 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 MAPK1IP1LQ8NDC0 245 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 WFDC11Q8NEX6 87 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 ATP6V0E2Q8NHE4 81 aa17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 ZNF48Q96MX3 618 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-220ENST00000613744 TMEM213A2RRL7 107 aa17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 LINC01619G3V211 115 aa17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 NPYP01303 97 aa17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 MRGPRG-AS1Q2M3A8 158 aa17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 S100A7AQ86SG5 101 aa17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 NXT2Q9NPJ8 142 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 MRPL16Q9NX20 251 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-220ENST00000613744 RPL27AP46776 148 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 SHANK2-AS3Q9BTD1 123 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 KAAG1Q9UBP8 84 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 PRO0461Q9UI25 63 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 ZNF469Q96JG9 3925 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 MED13LQ71F56 2210 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 DPM2O94777 84 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 DSCR9P59020 149 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 PLGLAQ15195 96 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 HCP5Q6MZN7 132 aa17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 Q71RC1 249 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-220ENST00000613744 NPIPB5A8MRT5 1133 aa17.08■□□□□ 0.33
POLR2J3-220ENST00000613744 TWIST1Q15672 202 aa17.08■□□□□ 0.33
POLR2J3-220ENST00000613744 C12orf74Q32Q52 190 aa17.08■□□□□ 0.33
POLR2J3-220ENST00000613744 ETDBQ3ZM63 59 aa17.08■□□□□ 0.33
POLR2J3-220ENST00000613744 TMEM155Q4W5P6 130 aa17.08■□□□□ 0.33
POLR2J3-220ENST00000613744 RNF223E7ERA6 249 aa17.08■□□□□ 0.32
POLR2J3-220ENST00000613744 H3BRN7 92 aa17.08■□□□□ 0.32
POLR2J3-220ENST00000613744 CYSRT1A8MQ03 144 aa17.07■□□□□ 0.32
POLR2J3-220ENST00000613744 SRSF2Q01130 221 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-220ENST00000613744 FOXC2Q99958 501 aa17.07■□□□□ 0.32
POLR2J3-220ENST00000613744 A0A1B0GWB2 263 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 PDE6HQ13956 83 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 RRN3P1Q2M238 152 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 ARHGAP32A7KAX9 2087 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 TRAV26-1A0A087WT03 109 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 LMO4P61968 165 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 ZNF418Q8TF45 676 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 ARPC1AQ92747 370 aa17.06■□□□□ 0.32
POLR2J3-220ENST00000613744 CELSR1Q9NYQ6 3014 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 H3BMG7 143 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 SH2D1AO60880 128 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 FXYD7P58549 80 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 RASL11BQ9BPW5 248 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 GEMIN7Q9H840 131 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 SVEP1Q4LDE5 3571 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 CRYBA4P53673 196 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 SH2D6Q7Z4S9 175 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 WFDC12Q8WWY7 111 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 TPSG1Q9NRR2 321 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 CYSLTR1Q9Y271 337 aa17.05■□□□□ 0.32
POLR2J3-220ENST00000613744 PRSS1P07477 247 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 SLC25A16P16260 332 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 LEPP41159 167 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 KLRD1Q13241 179 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 TMEM200BQ69YZ2 307 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 TMEM133Q9H2Q1 129 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 MALRD1Q5VYJ5 2156 aa17.04■□□□□ 0.32
POLR2J3-220ENST00000613744 CRYGBP07316 175 aa17.03■□□□□ 0.32
POLR2J3-220ENST00000613744 CCL3L1P16619 93 aa17.03■□□□□ 0.32
POLR2J3-220ENST00000613744 IGLC6P0CF74 106 aa17.03■□□□□ 0.32
POLR2J3-220ENST00000613744 ZC2HC1BQ5TFG8 222 aa17.03■□□□□ 0.32
POLR2J3-220ENST00000613744 C8orf49Q96NF6 230 aa17.03■□□□□ 0.32
POLR2J3-220ENST00000613744 MYO9AB2RTY4 2548 aa17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 A0A096LNT2 108 aa17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 MRPS12O15235 138 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 ZFP36P26651 326 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 CNFNQ9BYD5 112 aa17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 AAMDCQ9H7C9 122 aa17.02■□□□□ 0.32
POLR2J3-220ENST00000613744 C8orf86Q6ZUL3 223 aa17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 VCX2Q9H322 139 aa17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 I3L2K1 104 aa17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 GTSCR1Q86UQ5 136 aa17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 SRSF8Q9BRL6 282 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 C1QTNF4Q9BXJ3 329 aa17.01■□□□□ 0.31
POLR2J3-220ENST00000613744 ITPR3Q14573 2671 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms