RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PFDN1O60925 122 aa18.43■□□□□ 0.54
VEGFA-226ENST00000611736 TCTE3Q8IZS6 198 aa18.43■□□□□ 0.54
VEGFA-226ENST00000611736 EIF4E3Q8N5X7 224 aaKnown RBP18.43■□□□□ 0.54
VEGFA-226ENST00000611736 TMED6Q8WW62 240 aa18.43■□□□□ 0.54
VEGFA-226ENST00000611736 NDUFAF3Q9BU61 184 aa18.43■□□□□ 0.54
VEGFA-226ENST00000611736 LENEPQ9Y5L5 61 aa18.43■□□□□ 0.54
VEGFA-226ENST00000611736 MAP1LC3B2A6NCE7 125 aa18.42■□□□□ 0.54
VEGFA-226ENST00000611736 SUMO1P63165 101 aaKnown RBP18.42■□□□□ 0.54
VEGFA-226ENST00000611736 LINC00467Q9BRT7 94 aa18.42■□□□□ 0.54
VEGFA-226ENST00000611736 MAP1LC3BQ9GZQ8 125 aa18.42■□□□□ 0.54
VEGFA-226ENST00000611736 FHITP49789 147 aa18.41■□□□□ 0.54
VEGFA-226ENST00000611736 UBE2G2P60604 165 aa18.41■□□□□ 0.54
VEGFA-226ENST00000611736 SGK494Q96LW2 274 aa18.41■□□□□ 0.54
VEGFA-226ENST00000611736 DNAH6Q9C0G6 4158 aa18.4■□□□□ 0.54
VEGFA-226ENST00000611736 IGHV1OR15-1A0A075B7D0 117 aa18.4■□□□□ 0.54
VEGFA-226ENST00000611736 TCRAP04437 139 aa18.4■□□□□ 0.54
VEGFA-226ENST00000611736 ZNF680Q8NEM1 530 aa18.4■□□□□ 0.54
VEGFA-226ENST00000611736 GSN-AS1Q9NRJ2 163 aa18.4■□□□□ 0.54
VEGFA-226ENST00000611736 A0A1W2PRE2 83 aa18.39■□□□□ 0.53
VEGFA-226ENST00000611736 SEC11BP0C7V7 166 aa18.39■□□□□ 0.53
VEGFA-226ENST00000611736 ANXA2RQ3ZCQ2 193 aa18.39■□□□□ 0.53
VEGFA-226ENST00000611736 TP53TG3Q9ULZ0 132 aa18.39■□□□□ 0.53
VEGFA-226ENST00000611736 EPDR1Q9UM22 224 aa18.39■□□□□ 0.53
VEGFA-226ENST00000611736 SERTM2A0A1B0GWG4 89 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 K7EQM0 130 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 EIF5AP63241 154 aaKnown RBP18.38■□□□□ 0.53
VEGFA-226ENST00000611736 MUC21Q5SSG8 566 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 TMEM88Q6PEY1 159 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 C11orf72Q8NBR9 251 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 TVP23CQ96ET8 276 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 FAM210BQ96KR6 192 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 TREM1Q9NP99 234 aa18.38■□□□□ 0.53
VEGFA-226ENST00000611736 GAGE12BA1L429 117 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 F5H768 121 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 F6UZH7 168 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 GAGE7O76087 117 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 ATP5G1P05496 136 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 GAGE12FP0CL80 117 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 GAGE12GP0CL81 117 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 GAGE12IP0CL82 117 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 ATP5G3P48201 142 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 Q6AWC8 147 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 FAM213BQ8TBF2 198 aa18.37■□□□□ 0.53
VEGFA-226ENST00000611736 TPT1P13693 172 aaKnown RBP18.36■□□□□ 0.53
VEGFA-226ENST00000611736 DAZ2Q13117 558 aaKnown RBP18.36■□□□□ 0.53
VEGFA-226ENST00000611736 CYB561D1Q8N8Q1 229 aa18.36■□□□□ 0.53
VEGFA-226ENST00000611736 STOML3Q8TAV4 291 aa18.36■□□□□ 0.53
VEGFA-226ENST00000611736 UMAD1C9J7I0 102 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 IFNA7P01567 189 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 LGALSLQ3ZCW2 172 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-226ENST00000611736 Q6ZTI0 123 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 AKAP14Q86UN6 197 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 LINC00612Q8N6U2 182 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 ATG101Q9BSB4 218 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 NAGKQ9UJ70 344 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 KLF12Q9Y4X4 402 aa18.35■□□□□ 0.53
VEGFA-226ENST00000611736 FAM74A7A6NL05 159 aa18.34■□□□□ 0.53
VEGFA-226ENST00000611736 C1QBP02746 253 aa18.34■□□□□ 0.53
VEGFA-226ENST00000611736 NDFIP1Q9BT67 221 aa18.34■□□□□ 0.53
VEGFA-226ENST00000611736 PSG8Q9UQ74 426 aa18.34■□□□□ 0.53
VEGFA-226ENST00000611736 A0A1B0GV50 99 aa18.33■□□□□ 0.52
VEGFA-226ENST00000611736 TCL1AP56279 114 aa18.33■□□□□ 0.52
VEGFA-226ENST00000611736 IBA57Q5T440 356 aaKnown RBP18.33■□□□□ 0.52
VEGFA-226ENST00000611736 PRNTQ86SH4 94 aa18.33■□□□□ 0.52
VEGFA-226ENST00000611736 TRGV1A0A0A0MS02 117 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 IGLV2-11P01706 119 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 FLI1Q01543 452 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-226ENST00000611736 FAM159AQ6UWV7 190 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 TMEM75Q8N9X5 138 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 SFT2D1Q8WV19 159 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 C8orf49Q96NF6 230 aa18.32■□□□□ 0.52
VEGFA-226ENST00000611736 TRAV34A0A0B4J273 112 aa18.31■□□□□ 0.52
VEGFA-226ENST00000611736 ZNF415Q09FC8 603 aa18.31■□□□□ 0.52
VEGFA-226ENST00000611736 TMEM183BQ1AE95 376 aa18.31■□□□□ 0.52
VEGFA-226ENST00000611736 TMEM183AQ8IXX5 376 aa18.31■□□□□ 0.52
VEGFA-226ENST00000611736 LINC00479Q96M42 142 aa18.31■□□□□ 0.52
VEGFA-226ENST00000611736 NKX6-2Q9C056 277 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-226ENST00000611736 TRAV21A0A0B4J279 112 aa18.3■□□□□ 0.52
VEGFA-226ENST00000611736 PEX7O00628 323 aa18.3■□□□□ 0.52
VEGFA-226ENST00000611736 DPPA3Q6W0C5 159 aa18.3■□□□□ 0.52
VEGFA-226ENST00000611736 MBD3L1Q8WWY6 194 aa18.3■□□□□ 0.52
VEGFA-226ENST00000611736 TRGV2A0A075B6R0 118 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 SPINK4O60575 86 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 P0DMU3 169 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 FAM231AP0DMU4 169 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 FAM231CP0DMU5 169 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 CST9LP1Q5W188 147 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 MDFICQ9P1T7 246 aa18.29■□□□□ 0.52
VEGFA-226ENST00000611736 OR5I1Q13606 314 aa18.28■□□□□ 0.52
VEGFA-226ENST00000611736 MRPL16Q9NX20 251 aaKnown RBP18.28■□□□□ 0.52
VEGFA-226ENST00000611736 MUC4Q99102 2169 aa18.28■□□□□ 0.52
VEGFA-226ENST00000611736 TRGV11A0A075B6L2 103 aa18.27■□□□□ 0.52
VEGFA-226ENST00000611736 FBLL1A6NHQ2 334 aaKnown RBP18.27■□□□□ 0.52
VEGFA-226ENST00000611736 GCGP01275 180 aa18.27■□□□□ 0.52
VEGFA-226ENST00000611736 PPT1P50897 306 aa18.27■□□□□ 0.52
VEGFA-226ENST00000611736 ZNF80P51504 273 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-226ENST00000611736 C15orf53Q8NAA6 179 aa18.27■□□□□ 0.52
VEGFA-226ENST00000611736 HIST1H2BAQ96A08 127 aa18.27■□□□□ 0.52
VEGFA-226ENST00000611736 H2AFB1P0C5Y9 115 aa18.26■□□□□ 0.51
VEGFA-226ENST00000611736 HOXA5P20719 270 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms