RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LOC389332A0A1B0GUA5 103 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 HES1Q14469 280 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 MAPK1IP1LQ8NDC0 245 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 SLC25A33Q9BSK2 321 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 IGHV4-30-2A0A087WSY4 118 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 RBPMS2Q6ZRY4 209 aaKnown RBP12.49□□□□□ -0.41
RTN1-209ENST00000611068 TEX29Q8N6K0 151 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 FAM167A-AS1Q96KT0 104 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 SLC25A2Q9BXI2 301 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 PPDPFQ9H3Y8 114 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 COX6B1P14854 86 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 C8orf31Q8N9H6 132 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 RAX2Q96IS3 184 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 CARD19Q96LW7 228 aa12.49□□□□□ -0.41
RTN1-209ENST00000611068 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE7O76087 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 GAGE4Q13068 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 IGHV3-21A0A0B4J1V1 117 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 PLGLAQ15195 96 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 POU2AF1Q16633 256 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 HIGD1BQ9P298 99 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
RTN1-209ENST00000611068 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 CGB1A6NKQ9 187 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 M0QXV9 152 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 P01737 135 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 HOXB4P17483 251 aaPredicted RBP12.47□□□□□ -0.41
RTN1-209ENST00000611068 DPM3Q9P2X0 92 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 LY6LH3BQJ8 138 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
RTN1-209ENST00000611068 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
RTN1-209ENST00000611068 MOSP00540 346 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 WT1-ASQ06250 92 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 RRN3P1Q2M238 152 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 MRGPRG-AS1Q2M3A8 158 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 Q71RC1 249 aaPredicted RBP12.46□□□□□ -0.41
RTN1-209ENST00000611068 AJUBAQ96IF1 538 aa12.46□□□□□ -0.41
RTN1-209ENST00000611068 HELZ2Q9BYK8 2649 aaKnown RBP12.46□□□□□ -0.41
RTN1-209ENST00000611068 M0R1W7 72 aa12.46□□□□□ -0.42
RTN1-209ENST00000611068 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.42
RTN1-209ENST00000611068 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.42
RTN1-209ENST00000611068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.42
RTN1-209ENST00000611068 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
RTN1-209ENST00000611068 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
RTN1-209ENST00000611068 KMT2BQ9UMN6 2715 aaPredicted RBP12.45□□□□□ -0.42
RTN1-209ENST00000611068 OR1L8Q8NGR8 309 aa12.45□□□□□ -0.42
RTN1-209ENST00000611068 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
RTN1-209ENST00000611068 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
RTN1-209ENST00000611068 C19orf71A6NCJ1 209 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 NDUFV3P56181 108 aaKnown RBP12.44□□□□□ -0.42
RTN1-209ENST00000611068 RUSC1-AS1Q66K80 236 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 APCP25054 2843 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 AGRNO00468 2067 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 NCBP2LA6PVI3 153 aaKnown RBP12.44□□□□□ -0.42
RTN1-209ENST00000611068 C10orf105Q8TEF2 133 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
RTN1-209ENST00000611068 HAX1O00165 279 aa12.43□□□□□ -0.42
RTN1-209ENST00000611068 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
RTN1-209ENST00000611068 CT45A10P0DMU9 189 aa12.43□□□□□ -0.42
RTN1-209ENST00000611068 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
RTN1-209ENST00000611068 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
RTN1-209ENST00000611068 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 ODF3BA8MYP8 253 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 RNASE2P10153 161 aaKnown RBP12.42□□□□□ -0.42
RTN1-209ENST00000611068 SFTA2Q6UW10 78 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 HHLA3Q9XRX5 114 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
RTN1-209ENST00000611068 RHODO00212 210 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 SAA4P35542 130 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
RTN1-209ENST00000611068 CT83Q5H943 113 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 CFHR4Q92496 578 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 FCER1GP30273 86 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 MAPKAPK5-AS1Q8N8E1 139 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 PF4V1P10720 104 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 SRD5A1P18405 259 aa12.41□□□□□ -0.42
RTN1-209ENST00000611068 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms