RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 TAS2R30P59541 319 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 GUK1Q16774 197 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 MIR17HGQ75NE6 70 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 NFE4Q86UQ8 179 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 MITD1Q8WV92 249 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 LINC00477Q96M19 166 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 ARPC5LQ9BPX5 153 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 BCL7BQ9BQE9 202 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 SEC22CQ9BRL7 303 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 GGACTQ9BVM4 153 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 C11orf1Q9H5F2 150 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 Q9HAA7 133 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 UQCC1Q9NVA1 299 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 RNF24Q9Y225 148 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 LRCOL1A6NCL2 159 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 OR10J4P0C629 311 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 HIST1H1EP10412 219 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 CRISP2P16562 243 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 FGF7P21781 194 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 EVI2AP22794 236 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 S100A10P60903 97 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 WFDC2Q14508 124 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 TMEM183BQ1AE95 376 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 IBA57Q5T440 356 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 TMEM78Q5T7P6 136 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 TRIQKQ629K1 86 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 C9orf47Q6ZRZ4 202 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 TMEM183AQ8IXX5 376 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 Q8N3U1 123 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 THAP6Q8TBB0 222 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 MRPL53Q96EL3 112 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 PHYHIPLQ96FC7 376 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 MRPL32Q9BYC8 188 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 ZNF492Q9P255 531 aa5.79□□□□□ -1.48
SHKBP1-220ENST00000599716 TRAV6A0A075B6T7 132 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 TRAV9-2A0A087WT02 112 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 C5orf51A6NDU8 294 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 LECT2O14960 151 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 PSCAO43653 123 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 ZNF253O75346 499 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 RPL29P47914 159 aaKnown RBP5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 RAB31Q13636 194 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 LINC01620Q4KN68 170 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM167A-AS1Q96KT0 104 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 PFDN5Q99471 154 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 SLC25A31Q9H0C2 315 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 AAMDCQ9H7C9 122 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 TMEM14CQ9P0S9 112 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 NAGKQ9UJ70 344 aa5.78□□□□□ -1.48
SHKBP1-220ENST00000599716 NAP1L6A6NFF2 107 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 GNRH2O43555 120 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-30P01768 117 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-33P01772 117 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-30-3P0DP02 117 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-30-5P0DP03 117 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 ZNF138P52744 262 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 RAB32Q13637 225 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 ZNF846Q147U1 533 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 VWC2Q2TAL6 325 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 SPANXN2Q5MJ10 180 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 TMEM252Q8N6L7 170 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 NHLRC2Q8NBF2 726 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 PCNPQ8WW12 178 aaKnown RBP5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 DEDD2Q8WXF8 326 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 C20orf85Q9H1P6 137 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 GPN1Q9HCN4 374 aaPredicted RBP5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 PRELID1Q9Y255 219 aa5.77□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-73A0A0B4J1V6 119 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 PLA2G10O15496 165 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 NBEAP1P0C6P0 100 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 IL7P13232 177 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 SULT1A1P50225 295 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 NHLH2Q02577 135 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 SLAQ13239 276 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 C4orf48Q5BLP8 95 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 C12orf45Q8N5I9 185 aaPredicted RBP5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 Q8N814 137 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 OR10G4Q8NGN3 311 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 FXYD5Q96DB9 178 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 NPCDR1Q9BY65 106 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 OR51M1Q9H341 326 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 RPH3ALQ9UNE2 315 aa5.76□□□□□ -1.49
SHKBP1-220ENST00000599716 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 F6UZH7 168 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 PPT1P50897 306 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 RANP62826 216 aaKnown RBP5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 PDE6HQ13956 83 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 OR4C5Q8NGB2 326 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 HYLS1Q96M11 299 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 TMEM70Q9BUB7 260 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 PAXXQ9BUH6 204 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 RBM38Q9H0Z9 239 aaKnown RBP5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 LYRM2Q9NU23 88 aaPredicted RBP5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 TNXBP22105 4242 aa5.75□□□□□ -1.49
SHKBP1-220ENST00000599716 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 C9JCJ5 164 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 SIX6O95475 246 aa5.74□□□□□ -1.49
SHKBP1-220ENST00000599716 S100A11P31949 105 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms