RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PMVKQ15126 192 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 RNF114Q9Y508 228 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 COL8A2P25067 703 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 SPXQ9BT56 116 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 HIGD1BQ9P298 99 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 PCNX2A6NKB5 2137 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 H3BMM0 161 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 M0R1W7 72 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 SLC25A20O43772 301 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 THBDP07204 575 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 FGF6P10767 208 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 PIMREGQ9BSJ6 248 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 PLXNB1O43157 2135 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 A0A0G2JNJ9 132 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 K7EMI3 77 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 TCF15Q12870 199 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 C3orf36Q3SXR2 165 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 Q9UFV3 132 aa10.37□□□□□ -0.75
PCDHGB3-201ENST00000576222 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 TMEM131Q92545 1883 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 MORN3Q6PF18 240 aaPredicted RBP10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 LINC01587Q99440 93 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 EP400Q96L91 3159 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 LHBP01229 141 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 MBD6Q96DN6 1003 aa10.36□□□□□ -0.75
PCDHGB3-201ENST00000576222 IFITM1P13164 125 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 HLA-DMBP28068 263 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 TMEM141Q96I45 108 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 MSRB1Q9NZV6 116 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 MRPL36Q9P0J6 103 aaKnown RBP10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 TNRC6AQ8NDV7 1962 aaKnown RBP10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 IGKV1-17P01599 117 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 NEGR1Q7Z3B1 354 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 TMEM219Q86XT9 240 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 E7EQL1 145 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 FCN3O75636 299 aa10.35□□□□□ -0.75
PCDHGB3-201ENST00000576222 PRSS29PA6NIE9 313 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 B5MCH6 92 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE5Q13069 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE6Q13070 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 PRSS22Q9GZN4 317 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE12JA6NER3 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE7O76087 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 GAGE4Q13068 117 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 LY6G5BQ8NDX9 201 aa10.34□□□□□ -0.75
PCDHGB3-201ENST00000576222 E7EUB6 86 aa10.33□□□□□ -0.75
PCDHGB3-201ENST00000576222 LY6HO94772 140 aa10.33□□□□□ -0.75
PCDHGB3-201ENST00000576222 C8orf86Q6ZUL3 223 aa10.33□□□□□ -0.75
PCDHGB3-201ENST00000576222 C20orf78Q9BR46 151 aa10.33□□□□□ -0.75
PCDHGB3-201ENST00000576222 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 LINC00310P59036 64 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 SDHAF1A6NFY7 115 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 ATP5J2P56134 94 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 C8orf31Q8N9H6 132 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 Q6ZS92 163 aa10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
PCDHGB3-201ENST00000576222 INS-IGF2F8WCM5 200 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 J3QQQ9 107 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 EIF4EBP1Q13541 118 aaPredicted RBP10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 SS18L2Q9UHA2 77 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 LOXL1Q08397 574 aaPredicted RBP10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 CR1LQ2VPA4 569 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 C7orf69Q9H7B7 122 aa10.32□□□□□ -0.76
PCDHGB3-201ENST00000576222 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 CFHR4Q92496 578 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 I3L2K1 104 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 DYSFO75923 2080 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 ODF1Q14990 250 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 EDA2RQ9HAV5 297 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 KAAG1Q9UBP8 84 aa10.31□□□□□ -0.76
PCDHGB3-201ENST00000576222 RITA1Q96K30 269 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 K7EIM0 57 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 FOXI1Q12951 378 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 TRPT1Q86TN4 253 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms