RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TRAV12-2A0A075B6T6 113 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 TMEM183BQ1AE95 376 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 ZNF506Q5JVG8 444 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 ZNF705AQ6ZN79 300 aaPredicted RBP18.82■□□□□ 0.6
NME3-208ENST00000565379 ZFAND2AQ8N6M9 145 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 FAM210AQ96ND0 272 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 RARRES2Q99969 163 aa18.82■□□□□ 0.6
NME3-208ENST00000565379 SCO2A0A1W2PP80 73 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 C7orf71A4D174 169 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 SMIM9A6NGZ8 99 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 IFITM2Q01629 132 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 GFI1BQ5VTD9 330 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 PRNTQ86SH4 94 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 OR11H2Q8NH07 326 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 C2CD4CQ8TF44 421 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 NEU1Q99519 415 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 TMEM208Q9BTX3 173 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 TREM1Q9NP99 234 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 ZFP30Q9Y2G7 519 aa18.81■□□□□ 0.6
NME3-208ENST00000565379 LINC00479Q96M42 142 aa18.8■□□□□ 0.6
NME3-208ENST00000565379 NIPSNAP3BQ9BS92 247 aa18.8■□□□□ 0.6
NME3-208ENST00000565379 C1orf158Q8N1D5 194 aa18.79■□□□□ 0.6
NME3-208ENST00000565379 SGK494Q96LW2 274 aa18.79■□□□□ 0.6
NME3-208ENST00000565379 EIF5A2Q9GZV4 153 aaKnown RBP18.79■□□□□ 0.6
NME3-208ENST00000565379 HYDINQ4G0P3 5121 aa18.79■□□□□ 0.6
NME3-208ENST00000565379 TRAV34A0A0B4J273 112 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 H7BYZ3 331 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 MIFP14174 115 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 TAS2R60P59551 318 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 CLLU1Q5K131 121 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 Q86TA4 180 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 PCNPQ8WW12 178 aaKnown RBP18.78■□□□□ 0.6
NME3-208ENST00000565379 ALMS1Q8TCU4 4167 aa18.78■□□□□ 0.6
NME3-208ENST00000565379 TMEM250H0YL14 139 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 J3KRW8 73 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 RNASE4P34096 147 aaKnown RBP18.77■□□□□ 0.6
NME3-208ENST00000565379 TOR2AQ5JU69 321 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 TVP23CQ96ET8 276 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 LINC01587Q99440 93 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 MED9Q9NWA0 146 aa18.77■□□□□ 0.6
NME3-208ENST00000565379 KIR3DS1Q14943 382 aa18.76■□□□□ 0.59
NME3-208ENST00000565379 SMUG1Q53HV7 270 aa18.76■□□□□ 0.59
NME3-208ENST00000565379 Q6AWC8 147 aa18.76■□□□□ 0.59
NME3-208ENST00000565379 SMDT1Q9H4I9 107 aa18.76■□□□□ 0.59
NME3-208ENST00000565379 TRAV12-3A0A0B4J271 114 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 ZNF324O75467 553 aaPredicted RBP18.75■□□□□ 0.59
NME3-208ENST00000565379 LTAP01374 205 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 BTN1A1Q13410 526 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 COX8CQ7Z4L0 72 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 PYGO2Q9BRQ0 406 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 X6R8D5 127 aa18.75■□□□□ 0.59
NME3-208ENST00000565379 IGHV3OR16-12A0A075B7B8 117 aa18.74■□□□□ 0.59
NME3-208ENST00000565379 LINC00467Q9BRT7 94 aa18.74■□□□□ 0.59
NME3-208ENST00000565379 TRAV21A0A0B4J279 112 aa18.73■□□□□ 0.59
NME3-208ENST00000565379 RBMY1A1P0DJD3 496 aaKnown RBP18.73■□□□□ 0.59
NME3-208ENST00000565379 RBMY1CP0DJD4 496 aa18.73■□□□□ 0.59
NME3-208ENST00000565379 RPL35P42766 123 aaKnown RBP18.73■□□□□ 0.59
NME3-208ENST00000565379 PEA15Q15121 130 aa18.73■□□□□ 0.59
NME3-208ENST00000565379 RBMY1FQ15415 496 aaKnown RBP18.73■□□□□ 0.59
NME3-208ENST00000565379 RRN3P1Q2M238 152 aa18.73■□□□□ 0.59
NME3-208ENST00000565379 RGS13O14921 159 aa18.72■□□□□ 0.59
NME3-208ENST00000565379 PRR9Q5T870 116 aa18.72■□□□□ 0.59
NME3-208ENST00000565379 TMEM183AQ8IXX5 376 aa18.72■□□□□ 0.59
NME3-208ENST00000565379 SMIM12Q96EX1 92 aa18.72■□□□□ 0.59
NME3-208ENST00000565379 TMEM189A5PLL7 270 aa18.71■□□□□ 0.59
NME3-208ENST00000565379 BAGE2Q86Y30 109 aa18.71■□□□□ 0.59
NME3-208ENST00000565379 C8orf49Q96NF6 230 aa18.71■□□□□ 0.59
NME3-208ENST00000565379 C11orf68Q9H3H3 251 aaKnown RBP18.71■□□□□ 0.59
NME3-208ENST00000565379 IL17DQ8TAD2 202 aa18.7■□□□□ 0.58
NME3-208ENST00000565379 GCGP01275 180 aa18.69■□□□□ 0.58
NME3-208ENST00000565379 PFN1P07737 140 aaKnown RBP18.69■□□□□ 0.58
NME3-208ENST00000565379 ZNF493Q6ZR52 646 aa18.69■□□□□ 0.58
NME3-208ENST00000565379 Q8NAQ8 132 aa18.69■□□□□ 0.58
NME3-208ENST00000565379 DERL1Q9BUN8 251 aa18.68■□□□□ 0.58
NME3-208ENST00000565379 EPPK1P58107 5090 aaKnown RBP18.68■□□□□ 0.58
NME3-208ENST00000565379 IGHV1OR15-1A0A075B7D0 117 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 IGHV4-28A0A0C4DH34 117 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 FABP5P3A8MUU1 101 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 GNG4P50150 75 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 ANXA2RQ3ZCQ2 193 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 EIF4E3Q8N5X7 224 aaKnown RBP18.67■□□□□ 0.58
NME3-208ENST00000565379 C16orf74Q96GX8 76 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 MLST8Q9BVC4 326 aa18.67■□□□□ 0.58
NME3-208ENST00000565379 RAB19A4D1S5 217 aa18.66■□□□□ 0.58
NME3-208ENST00000565379 ZNF705GA8MUZ8 300 aaPredicted RBP18.66■□□□□ 0.58
NME3-208ENST00000565379 SRP19P09132 144 aaKnown RBP18.66■□□□□ 0.58
NME3-208ENST00000565379 CENPWQ5EE01 88 aa18.66■□□□□ 0.58
NME3-208ENST00000565379 FAM159AQ6UWV7 190 aa18.66■□□□□ 0.58
NME3-208ENST00000565379 C9JCJ5 164 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 HTN1P15515 57 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 TDRG1Q3Y452 100 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 FAM162BQ5T6X4 162 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 TMEM263Q8WUH6 116 aaKnown RBP18.65■□□□□ 0.58
NME3-208ENST00000565379 ZC2HC1AQ96GY0 325 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 KCNS1Q96KK3 526 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 PARLQ9H300 379 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 BIN3Q9NQY0 253 aa18.65■□□□□ 0.58
NME3-208ENST00000565379 CBY3A6NI87 242 aa18.64■□□□□ 0.57
NME3-208ENST00000565379 ZNF80P51504 273 aaPredicted RBP18.64■□□□□ 0.57
NME3-208ENST00000565379 A0A0J9YWU9 116 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms