RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SLC50A1Q9BRV3 221 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 A0A1W2PS18 150 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 K7EP13 123 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 GTSF1Q8WW33 167 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 GNB1LQ9BYB4 327 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 TLN2Q9Y4G6 2542 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 EDN2P20800 178 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 RPL19P84098 196 aaKnown RBP7.17□□□□□ -1.26
LINC00838-201ENST00000562956 ERCC8Q13216 396 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 CT83Q5H943 113 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 SMIM15Q7Z3B0 74 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 CUBNO60494 3623 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 FOXE3Q13461 319 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 GPHB5Q86YW7 130 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 Q8N2B8 174 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 BORCS7Q96B45 105 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 PRR25Q96S07 402 aa7.17□□□□□ -1.26
LINC00838-201ENST00000562956 A8MWL6 223 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 MPV17L2Q567V2 206 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 OR2D3Q8NGH3 330 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 MYOZ3Q8TDC0 251 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 DAZ1Q9NQZ3 744 aaKnown RBP7.16□□□□□ -1.26
LINC00838-201ENST00000562956 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
LINC00838-201ENST00000562956 IGHV7-4-1A0A0J9YVY3 117 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 CD5LO43866 347 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 ELANEP08246 267 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 GDF5OSQ5U4N7 250 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 TEX29Q8N6K0 151 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 RHPN1-AS1Q9BWJ2 59 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 YAE1D1Q9NRH1 226 aa7.16□□□□□ -1.26
LINC00838-201ENST00000562956 H0Y8G0 127 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 AMMECR1LQ6DCA0 310 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 WDR73Q6P4I2 378 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 NIT1Q86X76 327 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 C20orf173Q96LM9 149 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 HECTD1Q9ULT8 2610 aa7.15□□□□□ -1.26
LINC00838-201ENST00000562956 DNAJC9-AS1A6NH13 148 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 ZNF324O75467 553 aaPredicted RBP7.15□□□□□ -1.27
LINC00838-201ENST00000562956 CT45A10P0DMU9 189 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 IGLL1P15814 213 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 PMCHL1Q16048 86 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 COX8CQ7Z4L0 72 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 KLHDC1Q8N7A1 406 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 MCRIP2Q9BUT9 160 aaKnown RBP7.15□□□□□ -1.27
LINC00838-201ENST00000562956 GFRA4Q9GZZ7 299 aa7.15□□□□□ -1.27
LINC00838-201ENST00000562956 SONP18583 2426 aaKnown RBP7.15□□□□□ -1.27
LINC00838-201ENST00000562956 RBAKDNA6NC62 111 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 SAP30O75446 220 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 LGALS1P09382 135 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 RPL11P62913 178 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 TMEM86BQ8N661 226 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 RNF152Q8N8N0 203 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 WIPF2Q8TF74 440 aaPredicted RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 ESM1Q9NQ30 184 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 A0A1B0GXF2 115 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 FBLL1A6NHQ2 334 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 K7EMT4 169 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 SOCS3O14543 225 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 SH2D1AO60880 128 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 MT-ND6P03923 174 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 FAM162BQ5T6X4 162 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 RBPMS2Q6ZRY4 209 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 MRPL53Q96EL3 112 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 UBE2E2Q96LR5 201 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 AGPAT4-IT1Q9H0P7 198 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 CLEC5AQ9NY25 188 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 FASNP49327 2511 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 IGHV4OR15-8A0A075B7B6 117 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 A0A087WW49 117 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 NUDT3O95989 172 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 HLA-DQA1P01909 254 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 ESDP10768 282 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 CAMPP49913 170 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 SLAQ13239 276 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 COX19Q49B96 90 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 RNASEKQ6P5S7 137 aaKnown RBP7.14□□□□□ -1.27
LINC00838-201ENST00000562956 RASL11AQ6T310 242 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 C18orf65Q6ZTR6 163 aa7.14□□□□□ -1.27
LINC00838-201ENST00000562956 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 SNAI2O43623 268 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 SRD5A1P18405 259 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 Q0VG73 95 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 ATP5L2Q7Z4Y8 100 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 SSBP4Q9BWG4 385 aaPredicted RBP7.13□□□□□ -1.27
LINC00838-201ENST00000562956 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 MUC21A0A0G2JKD1 596 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 MUC21A0A140T8X8 626 aa7.13□□□□□ -1.27
LINC00838-201ENST00000562956 TMEM213A2RRL7 107 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms