RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 DIP2CQ9Y2E4 1556 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SHROOM3Q8TF72 1996 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TCTEX1D4Q5JR98 221 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SMIM9A6NGZ8 99 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 WT1-ASQ06250 92 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SS18Q15532 418 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 CFHR4Q92496 578 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 FAM236AA0A1B0GUQ0 79 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 FAM236BA0A1B0GV22 79 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 PATE3B3GLJ2 98 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 PPDPFQ9H3Y8 114 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.91□□□□□ -1.94
ATXN3-248ENST00000558190 B3GALT5-AS1P59052 145 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 ZNRD1Q9P1U0 126 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 CACNA1SQ13698 1873 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 ZFHX2Q9C0A1 2572 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-248ENST00000558190 LOC107984640A0A0U1RRK4 108 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TP53TG3Q9ULZ0 132 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TRIP12Q14669 1992 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-248ENST00000558190 F5H768 121 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SLPIP03973 132 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 F8VRH5 84 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 ETV2O00321 342 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-248ENST00000558190 UFSP1Q6NVU6 142 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 C3P01024 1663 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 LTBRP36941 435 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 C9orf106Q8NAJ2 232 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 DEFB124Q8NES8 71 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 SAP25Q8TEE9 199 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 CXCL5P42830 114 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 PHLPP1O60346 1717 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 ENHOQ6UWT2 76 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 U3KQK5 164 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 DYNAPQ8N1N2 210 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 DEFB130BP0DP73 79 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 DEFB130AP0DP74 79 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 LYPD6Q86Y78 171 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 Q0VFX4 171 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 FDCSPQ8NFU4 85 aa2.9□□□□□ -1.94
ATXN3-248ENST00000558190 COL5A2P05997 1499 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 WFDC11Q8NEX6 87 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 PKD1L2Q7Z442 2459 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 AKAP11Q9UKA4 1901 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 CTSGP08311 255 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 COL2A1P02458 1487 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV1-3A0A0C4DH29 117 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 DAND5Q8N907 189 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 CSDC2Q9Y534 153 aaKnown RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 FAM19A5Q7Z5A7 132 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 ATP6V0E2Q8NHE4 81 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV3-38A0A0C4DH36 116 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 USMG5Q96IX5 58 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 CRLF1O75462 422 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 TP53TG1Q9Y2A0 90 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 OOSP1A8MZH6 123 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 G3V318 75 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 Q6ZQT7 251 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 RNASE13Q5GAN3 156 aaKnown RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 SLIT3O75094 1523 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 WI2-2373I1.2A0A1W2PRP0 233 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
ATXN3-248ENST00000558190 FAM110AQ9BQ89 295 aa2.9□□□□□ -1.95
ATXN3-248ENST00000558190 C17orf58Q2M2W7 97 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 Q9H8V8 135 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 RGPD1P0DJD0 1748 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 CRIP1P50238 77 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 C5orf38Q86SI9 138 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 ICOSQ9Y6W8 199 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV1-8P0DP01 117 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 C20orf173Q96LM9 149 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 RPL35AP18077 110 aaKnown RBP2.89□□□□□ -1.95
ATXN3-248ENST00000558190 PROK2Q9HC23 129 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
ATXN3-248ENST00000558190 SERP2Q8N6R1 65 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 CRIPAKQ8N1N5 446 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 XCL2Q9UBD3 114 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 SCN11AQ9UI33 1791 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 BDP1A6H8Y1 2624 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 MYO16Q9Y6X6 1858 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 H7C423 109 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 SIGLEC15Q6ZMC9 328 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 C20orf197Q8N268 126 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 TOMM6Q96B49 74 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 DUOX1Q9NRD9 1551 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 PEMTQ9UBM1 199 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 IGF1P05019 195 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 NUP98P52948 1817 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 IGHV4-4A0A075B6R2 117 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 BSPH1Q075Z2 132 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 HIST2H2BCQ6DN03 193 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 HIST2H2BDQ6DRA6 164 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 Q8N976 141 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 PRAC2D3DTV9 90 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 POM121L12Q8N7R1 296 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 SMIM2Q9BVW6 85 aa2.89□□□□□ -1.95
ATXN3-248ENST00000558190 TP53BP1Q12888 1972 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms