RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 CEP192Q8TEP8 1941 aa4.13□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV3-43A0A0B4J1X8 118 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 A0A0B4J2C4 111 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 CECR9P0C854 216 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV3-43DP0DP04 118 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 CCL3P10147 92 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 UCNP55089 124 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 PDE6HQ13956 83 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 LAGE3Q14657 143 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 ATXN8Q156A1 80 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 ZNF672Q499Z4 452 aaPredicted RBP4.12□□□□□ -1.75
PCNX1-214ENST00000556849 GOLT1AQ6ZVE7 132 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 POM121L12Q8N7R1 296 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 IGFBPL1Q8WX77 278 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 PLA2G2FQ9BZM2 168 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 MED12LQ86YW9 2145 aa4.12□□□□□ -1.75
PCNX1-214ENST00000556849 GOLGA4Q13439 2230 aaKnown RBP4.11□□□□□ -1.75
PCNX1-214ENST00000556849 PTPRBP23467 1997 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 TRBV19A0A075B6N1 114 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV4-28A0A0C4DH34 117 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 TRBV30A0A0K0K1B3 111 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 DEFB108AA8MXU0 73 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 H3BMM0 161 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 CRYGDP07320 174 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 CFC1BP0CG36 223 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 CFC1P0CG37 223 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 SAA2P0DJI9 122 aaPredicted RBP4.11□□□□□ -1.75
PCNX1-214ENST00000556849 RPL7P18124 248 aaKnown RBP4.11□□□□□ -1.75
PCNX1-214ENST00000556849 PRDX2P32119 198 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 GLRXP35754 106 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 HERVK_113P63121 156 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
PCNX1-214ENST00000556849 EDDM3AQ14507 147 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 PMVKQ15126 192 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 ALKBH6Q3KRA9 238 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 LINC01620Q4KN68 170 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 ORMDL2Q53FV1 153 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 C9orf153Q5TBE3 101 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 Q6ZQT7 251 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 SLC25A29Q8N8R3 303 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 NEXN-AS1Q8NBZ9 246 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
PCNX1-214ENST00000556849 UBE2WQ96B02 151 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 UBTD1Q9HAC8 227 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 MSRB1Q9NZV6 116 aa4.11□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
PCNX1-214ENST00000556849 A0A0J9YY99 117 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TMEM89A2RUT3 159 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 LINC01548A6NM66 108 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TMEM178BH3BS89 294 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 SH2D1AO60880 128 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV3-33P01772 117 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 COX7CP15954 63 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 HERVK_113P61574 105 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 C17orf58Q2M2W7 97 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 FAM201AQ5SY85 155 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 IL17RELQ6ZVW7 336 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TDHQ8IZJ6 230 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 CD177Q8N6Q3 437 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 SAP25Q8TEE9 199 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TOMM6Q96B49 74 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
PCNX1-214ENST00000556849 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 KIAA1549Q9HCM3 1950 aa4.1□□□□□ -1.75
PCNX1-214ENST00000556849 ARHGEF17Q96PE2 2063 aaPredicted RBP4.1□□□□□ -1.75
PCNX1-214ENST00000556849 TRAV8-1A0A0A6YYK1 113 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 IGHV1-69DA0A0B4J2H0 117 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 SRRM5B3KS81 715 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 F5H768 121 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 H3BRN7 92 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 H3BVH4 76 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 MRPS12O15235 138 aaKnown RBP4.09□□□□□ -1.75
PCNX1-214ENST00000556849 ORM1P02763 201 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 DLX6P56179 175 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 TMEM258P61165 79 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 WT1-ASQ06250 92 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 ZNF415Q09FC8 603 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 C8orf31Q8N9H6 132 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 FAM173AQ9BQD7 235 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 SHANK2-AS3Q9BTD1 123 aa4.09□□□□□ -1.75
PCNX1-214ENST00000556849 PCSK5Q92824 1860 aa4.09□□□□□ -1.76
PCNX1-214ENST00000556849 IGKV1D-17A0A075B6S4 117 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 A0A0J9YX75 114 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 SMKR1H3BMG3 65 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 PAX4O43316 350 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 SCRG1O75711 98 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 NDUFA3O95167 84 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 IGHV3-13P01766 116 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 COX6A1P12074 109 aa4.08□□□□□ -1.76
PCNX1-214ENST00000556849 CD59P13987 128 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms