RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 ZC2HC1AQ96GY0 325 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 C4orf3Q8WVX3 66 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 K7EIM0 57 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 DYSFO75923 2080 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 SLC25A20O43772 301 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 CD5LO43866 347 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 TMEM86BQ8N661 226 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 PIFOQ8TCI5 191 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 RASL10AQ92737 203 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 GSN-AS1Q9NRJ2 163 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 EML6Q6ZMW3 1958 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 A6NDX4 124 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 ZNF114Q8NC26 417 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
PTPN21-208ENST00000556564 LINC01549A6NIU2 74 aa13.52□□□□□ -0.24
PTPN21-208ENST00000556564 PAX4O43316 350 aa13.52□□□□□ -0.24
PTPN21-208ENST00000556564 TRBV24-1A0A075B6N3 115 aa13.52□□□□□ -0.25
PTPN21-208ENST00000556564 GNRH2O43555 120 aa13.52□□□□□ -0.25
PTPN21-208ENST00000556564 C5orf30Q96GV9 206 aa13.52□□□□□ -0.25
PTPN21-208ENST00000556564 SPAG8Q99932 426 aaPredicted RBP13.52□□□□□ -0.25
PTPN21-208ENST00000556564 MORN3Q6PF18 240 aaPredicted RBP13.51□□□□□ -0.25
PTPN21-208ENST00000556564 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
PTPN21-208ENST00000556564 I3L3M4 83 aa13.51□□□□□ -0.25
PTPN21-208ENST00000556564 SPXQ9BT56 116 aa13.51□□□□□ -0.25
PTPN21-208ENST00000556564 LY6G6DO95868 133 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PGPEP1Q9NXJ5 209 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 U3KQE9 123 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 CTSGP08311 255 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PRR20EP86478 221 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PRR20CP86479 221 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PRR20DP86480 221 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PRR20BP86481 221 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 PRR20AP86496 221 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 MYCNOSP40205 109 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 C2orf70A6NJV1 201 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 TEX22C9J3V5 150 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 M0R2P5 195 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 CLPSL2Q6UWE3 100 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 TP53TG1Q9Y2A0 90 aa13.5□□□□□ -0.25
PTPN21-208ENST00000556564 IGHG2P01859 326 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 TNFRSF13BO14836 293 aaPredicted RBP13.49□□□□□ -0.25
PTPN21-208ENST00000556564 CGB3P0DN86 165 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 SCGB1A1P11684 91 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 PLNP26678 52 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 CDSNQ15517 529 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 CST9LQ9H4G1 147 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 SRSF2Q01130 221 aaKnown RBP13.49□□□□□ -0.25
PTPN21-208ENST00000556564 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
PTPN21-208ENST00000556564 SPRY2O43597 315 aa13.49□□□□□ -0.25
PTPN21-208ENST00000556564 WIPF2Q8TF74 440 aaPredicted RBP13.48□□□□□ -0.25
PTPN21-208ENST00000556564 ZNF561-AS1K7EIQ3 104 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 TRBV12-3P01733 135 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 C11orf71Q6IPW1 123 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 FAM208BQ5VWN6 2430 aa13.48□□□□□ -0.25
PTPN21-208ENST00000556564 SEC11AP67812 179 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 PRSS57Q6UWY2 283 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 C9JQL5 133 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 E7EUB6 86 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 CFHR4Q92496 578 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 LRP4O75096 1905 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 TRAV9-2A0A087WT02 112 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 PLP1P60201 277 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 Q6YL49 198 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 JPT2Q9H910 190 aa13.47□□□□□ -0.25
PTPN21-208ENST00000556564 COLCA2A8K830 154 aa13.46□□□□□ -0.25
PTPN21-208ENST00000556564 LYPD6Q86Y78 171 aa13.46□□□□□ -0.25
PTPN21-208ENST00000556564 IGLV2-14P01704 120 aa13.46□□□□□ -0.25
PTPN21-208ENST00000556564 C16orf54Q6UWD8 224 aa13.46□□□□□ -0.25
PTPN21-208ENST00000556564 NHP2Q9NX24 153 aaKnown RBP13.46□□□□□ -0.25
PTPN21-208ENST00000556564 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.25
PTPN21-208ENST00000556564 TYMSP04818 313 aa13.46□□□□□ -0.26
PTPN21-208ENST00000556564 EREGO14944 169 aa13.46□□□□□ -0.26
PTPN21-208ENST00000556564 PLEKHB2Q96CS7 222 aa13.46□□□□□ -0.26
PTPN21-208ENST00000556564 FREM1Q5H8C1 2179 aa13.46□□□□□ -0.26
PTPN21-208ENST00000556564 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 ADCYAP1P18509 176 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 MRPL51Q4U2R6 128 aaKnown RBP13.45□□□□□ -0.26
PTPN21-208ENST00000556564 FAM104BQ5XKR9 115 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 PAX2Q02962 417 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 TIMM21Q9BVV7 248 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 LY6G5BQ8NDX9 201 aa13.45□□□□□ -0.26
PTPN21-208ENST00000556564 LAMTOR2Q9Y2Q5 125 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 LINC01548A6NM66 108 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
PTPN21-208ENST00000556564 UTF1Q5T230 341 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 HIST2H2BDQ6DRA6 164 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 DEFB4AO15263 64 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 LINC00518Q8N0U6 118 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 ESM1Q9NQ30 184 aa13.44□□□□□ -0.26
PTPN21-208ENST00000556564 PCNX3Q9H6A9 2034 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms