RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
ACTN1-217ENST00000556203 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 PFDN1O60925 122 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 TCRAP04437 139 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 SUMO1P63165 101 aaKnown RBP10.74□□□□□ -0.69
ACTN1-217ENST00000556203 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 TMUB2Q71RG4 321 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 C11orf72Q8NBR9 251 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
ACTN1-217ENST00000556203 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 A0A1W2PRE2 83 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 FHITP49789 147 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 UBE2G2P60604 165 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 TMEM88Q6PEY1 159 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 TP53TG3Q9ULZ0 132 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
ACTN1-217ENST00000556203 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 GAGE12BA1L429 117 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 F5H768 121 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 F6UZH7 168 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 K7EQM0 130 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 GAGE7O76087 117 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 ATP5G1P05496 136 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 ATP5G3P48201 142 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 EIF5AP63241 154 aaKnown RBP10.72□□□□□ -0.69
ACTN1-217ENST00000556203 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
ACTN1-217ENST00000556203 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 Q6AWC8 147 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 TREM1Q9NP99 234 aa10.72□□□□□ -0.69
ACTN1-217ENST00000556203 CYB561D1Q8N8Q1 229 aa10.71□□□□□ -0.69
ACTN1-217ENST00000556203 NDFIP1Q9BT67 221 aa10.71□□□□□ -0.69
ACTN1-217ENST00000556203 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.69
ACTN1-217ENST00000556203 FAM74A7A6NL05 159 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 UMAD1C9J7I0 102 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 TPT1P13693 172 aaKnown RBP10.7□□□□□ -0.7
ACTN1-217ENST00000556203 TCL1AP56279 114 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
ACTN1-217ENST00000556203 Q6ZTI0 123 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 FAM213BQ8TBF2 198 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 NAGKQ9UJ70 344 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 PSG8Q9UQ74 426 aa10.7□□□□□ -0.7
ACTN1-217ENST00000556203 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 IFNA7P01567 189 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 IGLV2-11P01706 119 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 LGALSLQ3ZCW2 172 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-217ENST00000556203 FAM159AQ6UWV7 190 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 TMEM75Q8N9X5 138 aa10.69□□□□□ -0.7
ACTN1-217ENST00000556203 SPINK4O60575 86 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 C1QBP02746 253 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 P0DMU3 169 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 FLI1Q01543 452 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-217ENST00000556203 ZNF415Q09FC8 603 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
ACTN1-217ENST00000556203 NKX6-2Q9C056 277 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-217ENST00000556203 TRGV11A0A075B6L2 103 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 TRGV2A0A075B6R0 118 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 A0A1B0GV50 99 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
ACTN1-217ENST00000556203 PEX7O00628 323 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 OR5I1Q13606 314 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 C15orf53Q8NAA6 179 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
ACTN1-217ENST00000556203 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
ACTN1-217ENST00000556203 ZNF80P51504 273 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-217ENST00000556203 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
ACTN1-217ENST00000556203 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
ACTN1-217ENST00000556203 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
ACTN1-217ENST00000556203 HIST1H2BAQ96A08 127 aa10.66□□□□□ -0.7
ACTN1-217ENST00000556203 GNRH2O43555 120 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 NUDT3O95989 172 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 GCGP01275 180 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 H2AFB1P0C5Y9 115 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 HOXA5P20719 270 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms