RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PGPEP1LA6NFU8 196 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 DUSP14O95147 198 aaKnown RBP10.75□□□□□ -0.69
SHMT2-208ENST00000553868 GCGP01275 180 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 CT45A10P0DMU9 189 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 C15orf54Q8N8G6 183 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 ANAPC16Q96DE5 110 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 VGLL1Q99990 258 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 DNAH10Q8IVF4 4471 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
SHMT2-208ENST00000553868 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
SHMT2-208ENST00000553868 IGLV2-8P01709 118 aa10.74□□□□□ -0.69
SHMT2-208ENST00000553868 HIST1H1AQ02539 215 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-208ENST00000553868 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
SHMT2-208ENST00000553868 SFRP2Q96HF1 295 aa10.74□□□□□ -0.69
SHMT2-208ENST00000553868 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
SHMT2-208ENST00000553868 K7EN84 100 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 DEFB131AP59861 70 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 ERCC8Q13216 396 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 SMUG1Q53HV7 270 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 NHLRC2Q8NBF2 726 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
SHMT2-208ENST00000553868 OSTCQ9NRP0 149 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 TMEM242Q9NWH2 141 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
SHMT2-208ENST00000553868 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-208ENST00000553868 A0A0J9YX75 114 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 IZUMO1RA6ND01 250 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 H7BYZ3 331 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 RNF212Q495C1 297 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 PRR27Q6MZM9 219 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 ATRAIDQ6UW56 229 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 Q8TAT8 98 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 ODF3Q96PU9 254 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 SAV1Q9H4B6 383 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-208ENST00000553868 MAP6D1Q9H9H5 199 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 SMCO4Q9NRQ5 59 aa10.72□□□□□ -0.69
SHMT2-208ENST00000553868 CXorf65A6NEN9 183 aa10.71□□□□□ -0.69
SHMT2-208ENST00000553868 OR11H12B2RN74 326 aa10.71□□□□□ -0.69
SHMT2-208ENST00000553868 KMT2AQ03164 3969 aa10.71□□□□□ -0.69
SHMT2-208ENST00000553868 OR5I1Q13606 314 aa10.71□□□□□ -0.69
SHMT2-208ENST00000553868 IBA57Q5T440 356 aaKnown RBP10.71□□□□□ -0.69
SHMT2-208ENST00000553868 F6UB75 175 aa10.7□□□□□ -0.7
SHMT2-208ENST00000553868 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-208ENST00000553868 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-208ENST00000553868 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-208ENST00000553868 TSPOP30536 169 aa10.7□□□□□ -0.7
SHMT2-208ENST00000553868 LEPP41159 167 aa10.7□□□□□ -0.7
SHMT2-208ENST00000553868 OR4B1Q8NGF8 309 aa10.7□□□□□ -0.7
SHMT2-208ENST00000553868 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
SHMT2-208ENST00000553868 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
SHMT2-208ENST00000553868 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
SHMT2-208ENST00000553868 P01737 135 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 HLA-DRB4P13762 266 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 S100PP25815 95 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 ZC2HC1AQ96GY0 325 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 HLA-DRB4X5D2U9 266 aa10.69□□□□□ -0.7
SHMT2-208ENST00000553868 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-208ENST00000553868 CRISP2P16562 243 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 DEFB1P60022 68 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 ACTL10Q5JWF8 245 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 KCNIP4Q6PIL6 250 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 NUDT10Q8NFP7 164 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 NUDT11Q96G61 164 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 CLUHP3Q96NS8 147 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 IMMP2LQ96T52 175 aa10.68□□□□□ -0.7
SHMT2-208ENST00000553868 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
SHMT2-208ENST00000553868 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 SCO1O75880 301 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 GPX1P07203 203 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 BTN1A1Q13410 526 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 CT83Q5H943 113 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 GDF5OSQ5U4N7 250 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 GTSCR1Q86UQ5 136 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
SHMT2-208ENST00000553868 RPP21Q9H633 154 aaKnown RBP10.67□□□□□ -0.7
SHMT2-208ENST00000553868 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 A8MTW9 85 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 H3BMM0 161 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 SH2D1AO60880 128 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
SHMT2-208ENST00000553868 TMEM88Q6PEY1 159 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 STHQ8IWL8 128 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 BTF3L4Q96K17 158 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 ZMAT4Q9H898 229 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 V9GYV3 84 aa10.66□□□□□ -0.7
SHMT2-208ENST00000553868 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 A8MWL6 223 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms