RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 HBG2P69892 147 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 ATP6V1FQ16864 119 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 IBA57Q5T440 356 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 STX12Q86Y82 276 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 ZNF479Q96JC4 524 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 OR51M1Q9H341 326 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 AAMDCQ9H7C9 122 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 PRO0255Q9UI72 69 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 HHLA3Q9XRX5 114 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 WFDC10BQ8IUB3 73 aa7.83□□□□□ -1.16
PRPF40B-212ENST00000551111 PAXXQ9BUH6 204 aa7.83□□□□□ -1.16
PRPF40B-212ENST00000551111 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 A0A087WTM6 91 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 FAM240BA0A1B0GVZ2 78 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 K7EQD1 137 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 NMBP08949 121 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 ZNF138P52744 262 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 RANP62826 216 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 HAMPP81172 84 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 LYPD1Q8N2G4 141 aa7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 MRPL32Q9BYC8 188 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-212ENST00000551111 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 MRPL23Q16540 153 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 TMEM183BQ1AE95 376 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 ARPC5LQ9BPX5 153 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 WDR61Q9GZS3 305 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
PRPF40B-212ENST00000551111 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 GNRH2O43555 120 aa7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 SMR3BP02814 79 aaPredicted RBP7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 GYPEP15421 78 aa7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 ZNF415Q09FC8 603 aa7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 ZNF266Q14584 549 aa7.8□□□□□ -1.16
PRPF40B-212ENST00000551111 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 OR7C2O60412 319 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 ERVFC1-1P60608 527 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 IFITM3Q01628 133 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 TVP23CQ96ET8 276 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 CCDC32Q9BV29 185 aa7.79□□□□□ -1.16
PRPF40B-212ENST00000551111 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 H2BFSP57053 126 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 ASAH1Q13510 395 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 FFAR4Q5NUL3 377 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 Q5VSD8 79 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 Q6AWC8 147 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 OR10G4Q8NGN3 311 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 RASL10AQ92737 203 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 HYLS1Q96M11 299 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 NMES1Q9C002 83 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 NAGKQ9UJ70 344 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 LY96Q9Y6Y9 160 aa7.78□□□□□ -1.16
PRPF40B-212ENST00000551111 TRAV8-1A0A0A6YYK1 113 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 TRBV7-9A0A0J9YWB2 115 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 RBAKDNA6NC62 111 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 SRIP30626 198 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 SLAQ13239 276 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 SMIM3Q9BZL3 60 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
PRPF40B-212ENST00000551111 F6UZH7 168 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 EREGO14944 169 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 CSN1S1P47710 185 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 MZT2BQ6NZ67 158 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 FAM159AQ6UWV7 190 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
PRPF40B-212ENST00000551111 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 PGPA6NDG6 321 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 HMGB3O15347 200 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 TYMSP04818 313 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 CRYGDP07320 174 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 GNG5P63218 68 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 TDRG1Q3Y452 100 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 NFE4Q86UQ8 179 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 ATP5SQ99766 215 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 SPXQ9BT56 116 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 C11orf21Q9P2W6 132 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 HSPB11Q9Y547 144 aa7.75□□□□□ -1.17
PRPF40B-212ENST00000551111 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 TRAV9-2A0A087WT02 112 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 EVI2AP22794 236 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 GCSHP23434 173 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms