RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PAFAH1B2P68402 229 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 FAM222AQ5U5X8 452 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 SSX7Q7RTT5 188 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 OR8A1Q8NGG7 326 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 RNASE8Q8TDE3 154 aaKnown RBP3.35□□□□□ -1.87
SCAF11-214ENST00000550893 FXYD5Q96DB9 178 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 IGF2BP2-AS1Q96M15 143 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 ARL6Q9H0F7 186 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 CACFD1Q9UGQ2 172 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 HIGD1AQ9Y241 93 aa3.35□□□□□ -1.87
SCAF11-214ENST00000550893 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
SCAF11-214ENST00000550893 SMCO3A2RU48 225 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-214ENST00000550893 BOLA2-SMG1P6H3BVE0 249 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 HYPMO75409 117 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 LY6G6CO95867 125 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 SULT1A1P50225 295 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 AP2S1P53680 142 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-214ENST00000550893 CMC4P56277 68 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-214ENST00000550893 PSG9Q00887 426 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 PSG3Q16557 428 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 MIR17HGQ75NE6 70 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 ZNF546Q86UE3 836 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 OR8I2Q8N0Y5 310 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 Q8N377 158 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 ZFAND2AQ8N6M9 145 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 Q8NBF4 154 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 PHYHIPLQ96FC7 376 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 LINC00052Q96N35 136 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 GGACTQ9BVM4 153 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 MFFQ9GZY8 342 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 NPVFQ9HCQ7 196 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 SLC39A9Q9NUM3 307 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 GSKIPQ9P0R6 139 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 PAIP2BQ9ULR5 123 aaKnown RBP3.34□□□□□ -1.87
SCAF11-214ENST00000550893 YTHDF2Q9Y5A9 579 aaKnown RBP3.34□□□□□ -1.87
SCAF11-214ENST00000550893 PXMP4Q9Y6I8 212 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 HERC1Q15751 4861 aa3.34□□□□□ -1.87
SCAF11-214ENST00000550893 TRBV19A0A075B6N1 114 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 FAM240BA0A1B0GVZ2 78 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 KLLNB2CW77 178 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 GOSR2O14653 212 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF324O75467 553 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 CFDP00746 253 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 CXCL2P19875 107 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 TSPOP30536 169 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 NUP62P37198 522 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 GALR1P47211 349 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 RPL29P47914 159 aaKnown RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 CAMLGP49069 296 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 MEOX2P50222 304 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 SNRPD3P62318 126 aaKnown RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 SELENOTP62341 195 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 CYCSP99999 105 aaKnown RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 ERCC8Q13216 396 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 OXA1LQ15070 435 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 MZT2BQ6NZ67 158 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 OR10P1Q8NGE3 313 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 OR4B1Q8NGF8 309 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 PPP1R1CQ8WVI7 109 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 RPUSD4Q96CM3 377 aaKnown RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 TVP23CQ96ET8 276 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 TMEM147Q9BVK8 224 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 NMES1Q9C002 83 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 WDR61Q9GZS3 305 aaKnown RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 RPRMQ9NS64 109 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 UQCC1Q9NVA1 299 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 TMEM14CQ9P0S9 112 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 MBD2Q9UBB5 411 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-214ENST00000550893 ALG5Q9Y673 324 aa3.33□□□□□ -1.88
SCAF11-214ENST00000550893 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 IGKV2-40A0A087WW87 121 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-214ENST00000550893 DEFB131BA0A096LNP1 70 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 FAM25EA8MYX2 175 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 IGLL5B9A064 214 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 INMT-MINDY4F8WBC2 141 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF253O75346 499 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 MPC2O95563 127 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 IFNA21P01568 189 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 IGKV2D-40P01614 121 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-214ENST00000550893 CRISP2P16562 243 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 RPL7P18124 248 aaKnown RBP3.32□□□□□ -1.88
SCAF11-214ENST00000550893 FGF7P21781 194 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 CAV2P51636 162 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 S100A10P60903 97 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 B2MP61769 119 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 HIST1H1AQ02539 215 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-214ENST00000550893 CD300CQ08708 224 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF846Q147U1 533 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 LCN15Q6UWW0 184 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 EXOC3-AS1Q8N2X6 119 aa3.32□□□□□ -1.88
SCAF11-214ENST00000550893 ZNF738Q8NE65 137 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms