RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 A0A087WX48 190 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 OVOL2Q9BRP0 275 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 MALRD1Q5VYJ5 2156 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 IGLL5B9A064 214 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 PRIMA1Q86XR5 153 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 IGHG3P01860 377 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 C11orf1Q9H5F2 150 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 FRMD6-AS1P0C7T7 363 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 GATA4P43694 442 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 LEPROTO15243 131 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
RBFOX1-212ENST00000550418 DUX4L9Q6RFH8 374 aaPredicted RBP12.58□□□□□ -0.39
RBFOX1-212ENST00000550418 NTN5Q8WTR8 489 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 SS18L2Q9UHA2 77 aa12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 PEMTQ9UBM1 199 aa12.58□□□□□ -0.4
RBFOX1-212ENST00000550418 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 GTF3C1Q12789 2109 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 TMEM219Q86XT9 240 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 ZNF625Q96I27 306 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 M0R1W7 72 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 WFDC2Q14508 124 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 C15orf53Q8NAA6 179 aa12.57□□□□□ -0.4
RBFOX1-212ENST00000550418 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 LINC00311Q8N616 119 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 MALP21145 153 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 J3QQQ9 107 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 RPL36AP83881 106 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 STHQ8IWL8 128 aa12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 RPL36ALQ969Q0 106 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-212ENST00000550418 G3V4G9 280 aa12.55□□□□□ -0.4
RBFOX1-212ENST00000550418 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
RBFOX1-212ENST00000550418 FXYD2P54710 66 aa12.55□□□□□ -0.4
RBFOX1-212ENST00000550418 Q8TCH9 128 aa12.55□□□□□ -0.4
RBFOX1-212ENST00000550418 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
RBFOX1-212ENST00000550418 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 EML6Q6ZMW3 1958 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 TRAV13-1A0A0B4J241 112 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 SHISA9B4DS77 424 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 J3QKU1 62 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 GNLYP22749 145 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
RBFOX1-212ENST00000550418 JPT2Q9H910 190 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 NUP210Q8TEM1 1887 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 UTF1Q5T230 341 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 LAMTOR3Q9UHA4 124 aa12.53□□□□□ -0.4
RBFOX1-212ENST00000550418 MED13Q9UHV7 2174 aa12.52□□□□□ -0.4
RBFOX1-212ENST00000550418 CFC1BP0CG36 223 aa12.52□□□□□ -0.4
RBFOX1-212ENST00000550418 CFC1P0CG37 223 aa12.52□□□□□ -0.4
RBFOX1-212ENST00000550418 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 DKK1O94907 266 aa12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 USMG5Q96IX5 58 aa12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 HIGD1BQ9P298 99 aa12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
RBFOX1-212ENST00000550418 PCDH15Q96QU1 1955 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 COL8A2P25067 703 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 C8orf86Q6ZUL3 223 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 SMIM20Q8N5G0 67 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 GTSF1Q8WW33 167 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 OTOGLQ3ZCN5 2332 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 PHLDA1Q8WV24 401 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-212ENST00000550418 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 SOCS3O14543 225 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 C11orf53Q8IXP5 236 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
RBFOX1-212ENST00000550418 I3L3M4 83 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms