RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ST6GAL2Q96JF0 529 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 LINC00467Q9BRT7 94 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
GABPB1-206ENST00000543881 SLC25A31Q9H0C2 315 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 Q9H8V8 135 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 OR10J4P0C629 311 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 DEFA1P59665 94 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 DEFA3P59666 94 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 EIF4E3Q8N5X7 224 aaKnown RBP8.19□□□□□ -1.1
GABPB1-206ENST00000543881 PHYHIPLQ96FC7 376 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 OR51M1Q9H341 326 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 AAMDCQ9H7C9 122 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 TP53TG3Q9ULZ0 132 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 KLF12Q9Y4X4 402 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 H3BNG1 76 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 GPX1P07203 203 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 PAXXQ9BUH6 204 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
GABPB1-206ENST00000543881 TRGV2A0A075B6R0 118 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 A0A096LPF7 62 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 TRGV1A0A0A0MS02 117 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 GATCO43716 136 aaKnown RBP8.17□□□□□ -1.1
GABPB1-206ENST00000543881 SPINK4O60575 86 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 PRAF2O60831 178 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 NMBP08949 121 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 NKX2-5P52952 324 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-206ENST00000543881 TCL1AP56279 114 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 TMEM78Q5T7P6 136 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 Q8TAT8 98 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 PPP1R1CQ8WVI7 109 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 UPK3BQ9BT76 320 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 MRPL32Q9BYC8 188 aaKnown RBP8.17□□□□□ -1.1
GABPB1-206ENST00000543881 FUT9Q9Y231 359 aa8.17□□□□□ -1.1
GABPB1-206ENST00000543881 CYCSP99999 105 aaKnown RBP8.16□□□□□ -1.1
GABPB1-206ENST00000543881 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
GABPB1-206ENST00000543881 ATP5SQ99766 215 aa8.16□□□□□ -1.1
GABPB1-206ENST00000543881 Q9H3A6 140 aa8.16□□□□□ -1.1
GABPB1-206ENST00000543881 MRPS16Q9Y3D3 137 aaKnown RBP8.16□□□□□ -1.1
GABPB1-206ENST00000543881 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.1
GABPB1-206ENST00000543881 MPC2O95563 127 aa8.15□□□□□ -1.1
GABPB1-206ENST00000543881 ZNF138P52744 262 aa8.15□□□□□ -1.1
GABPB1-206ENST00000543881 RANP62826 216 aaKnown RBP8.15□□□□□ -1.1
GABPB1-206ENST00000543881 FLI1Q01543 452 aaPredicted RBP8.15□□□□□ -1.1
GABPB1-206ENST00000543881 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
GABPB1-206ENST00000543881 LYPD1Q8N2G4 141 aa8.15□□□□□ -1.1
GABPB1-206ENST00000543881 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
GABPB1-206ENST00000543881 HSPB11Q9Y547 144 aa8.15□□□□□ -1.1
GABPB1-206ENST00000543881 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
GABPB1-206ENST00000543881 C17orf112F2Z3M2 114 aa8.14□□□□□ -1.11
GABPB1-206ENST00000543881 OR7C2O60412 319 aa8.14□□□□□ -1.11
GABPB1-206ENST00000543881 SMIM3Q9BZL3 60 aa8.14□□□□□ -1.11
GABPB1-206ENST00000543881 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
GABPB1-206ENST00000543881 IGHV3-53P01767 116 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 FFAR4Q5NUL3 377 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 Q5VSD8 79 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 TRBV7-9A0A0J9YWB2 115 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 A0A1W2PPQ1 181 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 SSNA1O43805 119 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 C1QBP02746 253 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
GABPB1-206ENST00000543881 XGP55808 180 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 UBE2L3P68036 154 aaKnown RBP8.13□□□□□ -1.11
GABPB1-206ENST00000543881 ZNF266Q14584 549 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 FRZBQ92765 325 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 MDFICQ9P1T7 246 aa8.13□□□□□ -1.11
GABPB1-206ENST00000543881 DIRC3C9JPN6 131 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 PAX4O43316 350 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 CSN1S1P47710 185 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 FHL2Q14192 279 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 Q5BKY6 102 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 MED9Q9NWA0 146 aa8.12□□□□□ -1.11
GABPB1-206ENST00000543881 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
GABPB1-206ENST00000543881 CRYBA4P53673 196 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 KHDC3LQ587J8 217 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 Q6AWC8 147 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 SCGB1C1Q8TD33 95 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 C8orf49Q96NF6 230 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
GABPB1-206ENST00000543881 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 F8W036 122 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 IFNA5P01569 189 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 PET100P0DJ07 73 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 LINC00315P59091 139 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-206ENST00000543881 HYLS1Q96M11 299 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 PRO0255Q9UI72 69 aa8.1□□□□□ -1.11
GABPB1-206ENST00000543881 HHLA3Q9XRX5 114 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms