RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 Q8N7P7 452 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 A0A1B0GW15 77 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 K7EMI3 77 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 TEX22C9J3V5 150 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 TTTY13Q9BZ97 58 aa12.65□□□□□ -0.38
VARS2-212ENST00000542001 ATP5LO75964 103 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 TTC9CQ8N5M4 171 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 TRAV21A0A0B4J279 112 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 IGLV2-8P01709 118 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 LTAP01374 205 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 FOXE3Q13461 319 aa12.64□□□□□ -0.39
VARS2-212ENST00000542001 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 ADORA2A-AS1P86434 159 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 SYNJ2BPP57105 145 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 NXT2Q9NPJ8 142 aaKnown RBP12.63□□□□□ -0.39
VARS2-212ENST00000542001 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 DPM2O94777 84 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 NBL1P41271 181 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 ORAOV1Q8WV07 137 aa12.63□□□□□ -0.39
VARS2-212ENST00000542001 IGKCP01834 107 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 BLCAPP62952 87 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 ZNF492Q9P255 531 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 DKK2Q9UBU2 259 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 UBE2E1P51965 193 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
VARS2-212ENST00000542001 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
VARS2-212ENST00000542001 CDSNQ15517 529 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 IGHV7-81A0A0B4J1V7 117 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 LYPD1Q8N2G4 141 aa12.62□□□□□ -0.39
VARS2-212ENST00000542001 SYT8Q8NBV8 401 aa12.61□□□□□ -0.39
VARS2-212ENST00000542001 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.392e-10■□□□□ 10.3
VARS2-212ENST00000542001 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
VARS2-212ENST00000542001 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
VARS2-212ENST00000542001 IGHV2-70DA0A0C4DH43 119 aa12.61□□□□□ -0.39
VARS2-212ENST00000542001 LGALS3P17931 250 aaKnown RBP12.61□□□□□ -0.39
VARS2-212ENST00000542001 PPBPP02775 128 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 CTSGP08311 255 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 ADGRG4Q8IZF6 3080 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 KIR2DL5BA0A0G2JN68 375 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 KIR2DL5BA0A0G2JPC4 375 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 KIR2DL5AQ8N109 375 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
VARS2-212ENST00000542001 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
VARS2-212ENST00000542001 KLK9Q9UKQ9 250 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 PRB1P04280 392 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
VARS2-212ENST00000542001 LINC01587Q99440 93 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 HOXB4P17483 251 aaPredicted RBP12.59□□□□□ -0.39
VARS2-212ENST00000542001 NPC2P61916 151 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 PDE6HQ13956 83 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 LAGE3Q14657 143 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 COX11Q9Y6N1 276 aa12.59□□□□□ -0.39
VARS2-212ENST00000542001 IGHV4-61A0A0C4DH41 118 aa12.58□□□□□ -0.39
VARS2-212ENST00000542001 FAM110DQ8TAY7 271 aaPredicted RBP12.58□□□□□ -0.39
VARS2-212ENST00000542001 OOSP1A8MZH6 123 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 CRXO43186 299 aaPredicted RBP12.58□□□□□ -0.4
VARS2-212ENST00000542001 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.4
VARS2-212ENST00000542001 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 DTX2Q86UW9 622 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 PCP2Q8IVA1 136 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 CSTL1Q9H114 145 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 TMEM8BA6NDV4 472 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 IGHV4-38-2P0DP08 117 aa12.58□□□□□ -0.4
VARS2-212ENST00000542001 A0A1B0GWB2 263 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 SMAGPQ0VAQ4 97 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 CFHR4Q92496 578 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
VARS2-212ENST00000542001 CIDEAO60543 219 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 TMEM14CQ9P0S9 112 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 ZNF292O60281 2723 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 CT83Q5H943 113 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 FANCD2OSQ96PS1 177 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 TRBV7-1A0A0A6YYK4 115 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 GNRH2O43555 120 aa12.57□□□□□ -0.4
VARS2-212ENST00000542001 CCL25O15444 150 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 TNFRSF18Q9Y5U5 241 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
VARS2-212ENST00000542001 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms