RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 EIF5AP63241 154 aaKnown RBP7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 IFITM2Q01629 132 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 SLAQ13239 276 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 PATE2Q6UY27 113 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 ZNF680Q8NEM1 530 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 OR10P1Q8NGE3 313 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 ODF3Q96PU9 254 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 WFDC1Q9HC57 220 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 PRO0255Q9UI72 69 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 SMCO3A2RU48 225 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 SPINK4O60575 86 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 SNRPCP09234 159 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 TPT1P13693 172 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 CRYBA4P53673 196 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 SLC38A11Q08AI6 406 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 ARL16Q0P5N6 197 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 ZNF266Q14584 549 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 ATP6V1FQ16864 119 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 RPL7L1Q6DKI1 246 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 TEPPQ6URK8 271 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 NEGR1Q7Z3B1 354 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 STOML3Q8TAV4 291 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 ATP5SQ99766 215 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 ARV1Q9H2C2 271 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 FAM30AQ9NZY2 134 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 HHLA3Q9XRX5 114 aa7.83□□□□□ -1.16
CLSTN3-209ENST00000539982 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 IFNA7P01567 189 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 ANXA2RQ3ZCQ2 193 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 WFDC10BQ8IUB3 73 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 GGACTQ9BVM4 153 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 KLF12Q9Y4X4 402 aa7.82□□□□□ -1.16
CLSTN3-209ENST00000539982 SLC17A3O00476 420 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 RGS13O14921 159 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 SLC25A5P05141 298 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 FHL2Q14192 279 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 VWC2Q2TAL6 325 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 PXDC1Q5TGL8 231 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 LINC00305Q7Z4B0 112 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 BPIFA4PQ86YQ2 179 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 EIF4E3Q8N5X7 224 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 SCGB1C1Q8TD33 95 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 PHYHIPLQ96FC7 376 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 NPVFQ9HCQ7 196 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 UQCC1Q9NVA1 299 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 PXMP4Q9Y6I8 212 aa7.81□□□□□ -1.16
CLSTN3-209ENST00000539982 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 C7orf71A4D174 169 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 FNDC10F2Z333 226 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 H3BTX0 84 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 PSCAO43653 123 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 TCL1AP56279 114 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 EIF5AL1Q6IS14 154 aaKnown RBP7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 C10orf126Q8N4M7 172 aa7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 SAT2Q96F10 170 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
CLSTN3-209ENST00000539982 CRYGDP07320 174 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 IGLC2P0DOY2 106 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 IBA57Q5T440 356 aaKnown RBP7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 ALKAL2Q6UX46 152 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 Q8N814 137 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 VGLL1Q99990 258 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 WDR61Q9GZS3 305 aaKnown RBP7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 PLA2G2DQ9UNK4 145 aa7.79□□□□□ -1.16
CLSTN3-209ENST00000539982 KLLNB2CW77 178 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 H3BQ15 152 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 K7EQD1 137 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 MPDU1O75352 247 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 SEC11BP0C7V7 166 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 FGF7P21781 194 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 SRIP30626 198 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 TMED6Q8WW62 240 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 TMEM37Q8WXS4 190 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 MRPL16Q9NX20 251 aaKnown RBP7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 WDR83OSQ9Y284 106 aa7.78□□□□□ -1.16
CLSTN3-209ENST00000539982 TRGV4A0A0C4DH28 118 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 RNASE4P34096 147 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 ZNF415Q09FC8 603 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 ERCC8Q13216 396 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 BTN1A1Q13410 526 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 GUK1Q16774 197 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 FAM19A4Q96LR4 140 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 LINC00477Q96M19 166 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 SH3BGRL3Q9H299 93 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
CLSTN3-209ENST00000539982 AGPAT2O15120 278 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 COX7A2P2O60397 106 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 OXTP01178 125 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 ORM1P02763 201 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms