RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RITA1Q96K30 269 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 RNF5Q99942 180 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 TMEM70Q9BUB7 260 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 TMEM191AQ9H0A3 160 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 COX11Q9Y6N1 276 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 LYSTQ99698 3801 aa4.5□□□□□ -1.69
CPSF7-219ENST00000539952 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 TEX50A0A1B0GTY4 177 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 H3BUA1 57 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 BRI3O95415 125 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 IGLV2-8P01709 118 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 APOA2P02652 100 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 TRGV3P03979 118 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 CSN3P07498 182 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 MGST1P10620 155 aaKnown RBP4.49□□□□□ -1.69
CPSF7-219ENST00000539952 MC5RP33032 325 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 CDKN1BP46527 198 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 RPS16P62249 146 aaKnown RBP4.49□□□□□ -1.69
CPSF7-219ENST00000539952 UBE2G1P62253 170 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 TM4SF20Q53R12 229 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 C10orf113Q5VZT2 155 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 UNQ5815/PRO19632Q6UWF5 114 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 S100A7AQ86SG5 101 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 PPP1R27Q86WC6 154 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
CPSF7-219ENST00000539952 IGF2BP2-AS1Q96M15 143 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 FAM110AQ9BQ89 295 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-219ENST00000539952 NDFIP1Q9BT67 221 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 PAXXQ9BUH6 204 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 RETNQ9HD89 108 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF492Q9P255 531 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 PEMTQ9UBM1 199 aa4.49□□□□□ -1.69
CPSF7-219ENST00000539952 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 TRBV6-1A0A0K0K1D8 114 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 IGLC7A0M8Q6 106 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 OR11H12B2RN74 326 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 H0YJW9 148 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 CORTO00230 105 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 PEX7O00628 323 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 COX7A2P2O60397 106 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 ACTL6BO94805 426 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 NDUFB8O95169 186 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 EGR2P11161 476 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-219ENST00000539952 NTF3P20783 257 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 MFAP2P55001 183 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 SYNJ2BPP57105 145 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 COTL1Q14019 142 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 PLGLAQ15195 96 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 TMEM177Q53S58 311 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 RPL39P5Q59GN2 51 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 SPATA31B1PQ5VZV4 182 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 NUP35Q8NFH5 326 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 NUDT10Q8NFP7 164 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 OR4C5Q8NGB2 326 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 FMC1Q96HJ9 113 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 USMG5Q96IX5 58 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 GPR82Q96P67 336 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF355PQ9NSJ1 428 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 PEF1Q9UBV8 284 aaKnown RBP4.48□□□□□ -1.69
CPSF7-219ENST00000539952 HSPB8Q9UJY1 196 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 KLF12Q9Y4X4 402 aa4.48□□□□□ -1.69
CPSF7-219ENST00000539952 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
CPSF7-219ENST00000539952 TRAV3A0A0B4J244 114 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF785A8K8V0 405 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 LEPROTL1O95214 131 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 SAA2P0DJI9 122 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-219ENST00000539952 MED14OSP0DP75 135 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 RNASE2P10153 161 aaKnown RBP4.47□□□□□ -1.69
CPSF7-219ENST00000539952 DEFA4P12838 97 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 LGALS7P47929 136 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 RPL8P62917 257 aaKnown RBP4.47□□□□□ -1.69
CPSF7-219ENST00000539952 UBE2L3P68036 154 aaKnown RBP4.47□□□□□ -1.69
CPSF7-219ENST00000539952 HBBP68871 147 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 RHOGP84095 191 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 TNXAQ16473 311 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 KIAA1644Q3SXP7 199 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 MRPL54Q6P161 138 aaKnown RBP4.47□□□□□ -1.69
CPSF7-219ENST00000539952 SLC25A34Q6PIV7 304 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF833PQ6ZTB9 187 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 PDPNQ86YL7 162 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 DEFB125Q8N687 156 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 STPG4Q8N801 248 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 TMEM167AQ8TBQ9 72 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 ZNF503Q96F45 646 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 HINT2Q9BX68 163 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 MAP1LC3CQ9BXW4 147 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 FBXL15Q9H469 300 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 NDUFA4L2Q9NRX3 87 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 EPDR1Q9UM22 224 aa4.47□□□□□ -1.69
CPSF7-219ENST00000539952 LOC102724200A0A096LPH7 203 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms