RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SDHAF1	A6NFY7	115 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	BLCAP	P62952	87 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PYGO2	Q9BRQ0	406 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	TMEM213	A2RRL7	107 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ANG	P03950	147 aa	Known RBP	12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	SLURP1	P55000	103 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ZNF491	Q8N8L2	437 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	CLPSL1	A2RUU4	121 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532	CXCL1	P09341	107 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PLXNA2	O75051	1894 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ZNF479	Q96JC4	524 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532		A0A096LPF7	62 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532	NPB	Q8NG41	125 aa		12.41	□□□□□ -0.42
NCAPD3-213	ENST00000534532	MYCNOS	P40205	109 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	C2orf66	Q6UXQ4	117 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	MRPL53	Q96EL3	112 aa	Known RBP	12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	NOP10	Q9NPE3	64 aa	Known RBP	12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ZC2HC1B	Q5TFG8	222 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532		Q8NFD4	153 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	VOPP1	Q96AW1	172 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	SPG11	Q96JI7	2443 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	FAM104B	Q5XKR9	115 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532		Q8NA96	180 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	IGHV3-38	A0A0C4DH36	116 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	IGLC7	A0M8Q6	106 aa		12.4	□□□□□ -0.42
NCAPD3-213	ENST00000534532	HEATR5A	Q86XA9	2040 aa		12.4	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SEM1	Q6ZVN7	128 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	KLF12	Q9Y4X4	402 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	IGHV7-81	A0A0B4J1V7	117 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SPART-AS1	P0CW21	52 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	PMVK	Q15126	192 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	PKIG	Q9Y2B9	76 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532		A0A0J9YY99	117 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	CCL18	P55774	89 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	LRRC75A-AS1	Q8N1F1	130 aa		12.39	□□□□□ -0.43
NCAPD3-213	ENST00000534532	HLA-DRB4	P13762	266 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SPRN	Q5BIV9	151 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	HLA-DRB4	X5D2U9	266 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	CHAC1	Q9BUX1	264 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	IGHV1-24	A0A0C4DH33	117 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532		Q8N8P6	123 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	WIPF2	Q8TF74	440 aa	Predicted RBP	12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	MTURN	Q8N3F0	131 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	TMEM126A	Q9H061	195 aa		12.38	□□□□□ -0.43
NCAPD3-213	ENST00000534532	HELZ	P42694	1942 aa	Known RBP	12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	IGKV2D-24	A0A075B6R9	120 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	VWC2L	B2RUY7	222 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	GUSBP1	Q15486	140 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	GSN-AS1	Q9NRJ2	163 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	AJUBA	Q96IF1	538 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	DNAJC30	Q96LL9	226 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	HIST1H2BL	Q99880	126 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	LOXL1	Q08397	574 aa	Predicted RBP	12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	ZNF493	Q6ZR52	646 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	ZNF625	Q96I27	306 aa	Predicted RBP	12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532		U3KQE9	123 aa		12.37	□□□□□ -0.43
NCAPD3-213	ENST00000534532	NEGR1	Q7Z3B1	354 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	BCL6B	Q8N143	479 aa	Predicted RBP	12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	LENEP	Q9Y5L5	61 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	ATP5G1	P05496	136 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	PFN2	P35080	140 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	KLF5	Q13887	457 aa	Predicted RBP	12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	RNF152	Q8N8N0	203 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	ZNF114	Q8NC26	417 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	IGKV1OR2-108	A0A075B7D4	117 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SYS1-DBNDD2	H3BUS1	97 aa		12.36	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SHANK1	Q9Y566	2161 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532		A0A1B0GV90	55 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532	ESD	P10768	282 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532	APRG1	Q8IVJ8	170 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532	PLXND1	Q9Y4D7	1925 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532		F6UB75	175 aa		12.35	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SH2D6	Q7Z4S9	175 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	C5orf56	Q8N8D9	126 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SNHG12	Q9BXW3	62 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	PRSS29P	A6NIE9	313 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	MRPL23	Q16540	153 aa	Known RBP	12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	SMAD5-AS1	Q9Y6J3	95 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	TMEM89	A2RUT3	159 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	C16orf74	Q96GX8	76 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	FAM231D	Q6ZW35	169 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	FXYD5	Q96DB9	178 aa		12.34	□□□□□ -0.43
NCAPD3-213	ENST00000534532	C1orf43	Q9BWL3	253 aa		12.33	□□□□□ -0.43
NCAPD3-213	ENST00000534532	TRAV8-4	A0A0B4J246	113 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	COLCA2	A8K830	154 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ZFP36	P26651	326 aa	Known RBP	12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	SAMD5	Q5TGI4	173 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532		Q8N9W7	124 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PIEZO1	Q92508	2521 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PTPN13	Q12923	2485 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IGLV2-23	P01705	113 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	HIST3H2BB	Q8N257	126 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ICOS	Q9Y6W8	199 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	MYLK	Q15746	1914 aa		12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	KLK5	Q9Y337	293 aa	Predicted RBP	12.33	□□□□□ -0.44
NCAPD3-213	ENST00000534532	RBAKDN	A6NC62	111 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C3orf79	P0CE67	100 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	KRTAP27-1	Q3LI81	207 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms