RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 BCL2L11O43521 198 aa15.06■□□□□ 0
PKP3-211ENST00000534401 TVP23CQ96ET8 276 aa15.06■□□□□ 0
PKP3-211ENST00000534401 NDUFAF3Q9BU61 184 aa15.06■□□□□ 0
PKP3-211ENST00000534401 BIRC6Q9NR09 4857 aa15.05■□□□□ 0
PKP3-211ENST00000534401 TCRAP04437 139 aa15.05■□□□□ -0
PKP3-211ENST00000534401 DEFB130BP0DP73 79 aa15.05■□□□□ -0
PKP3-211ENST00000534401 DEFB130AP0DP74 79 aa15.05■□□□□ -0
PKP3-211ENST00000534401 GNG5P63218 68 aa15.05■□□□□ -0
PKP3-211ENST00000534401 IBA57Q5T440 356 aaKnown RBP15.05■□□□□ -0
PKP3-211ENST00000534401 ZNF680Q8NEM1 530 aa15.05■□□□□ -0
PKP3-211ENST00000534401 DNAH6Q9C0G6 4158 aa15.05■□□□□ -0
PKP3-211ENST00000534401 IGHV1OR15-1A0A075B7D0 117 aa15.04■□□□□ -0
PKP3-211ENST00000534401 SUMO1P63165 101 aaKnown RBP15.04■□□□□ -0
PKP3-211ENST00000534401 C18orf15Q96N68 181 aa15.04■□□□□ -0
PKP3-211ENST00000534401 EPDR1Q9UM22 224 aa15.04■□□□□ -0
PKP3-211ENST00000534401 TRAV8-1A0A0A6YYK1 113 aa15.03■□□□□ -0
PKP3-211ENST00000534401 IGLV2-11P01706 119 aa15.03■□□□□ -0
PKP3-211ENST00000534401 ATP5G1P05496 136 aa15.03■□□□□ -0
PKP3-211ENST00000534401 ATP5G3P48201 142 aa15.03■□□□□ -0
PKP3-211ENST00000534401 TMUB2Q71RG4 321 aa15.03■□□□□ -0
PKP3-211ENST00000534401 TMPRSS5Q9H3S3 457 aa15.03■□□□□ -0
PKP3-211ENST00000534401 TP53TG3Q9ULZ0 132 aa15.03■□□□□ -0
PKP3-211ENST00000534401 MUC4Q99102 2169 aa15.02■□□□□ -0
PKP3-211ENST00000534401 SNURFLB1AK76 121 aa15.02■□□□□ -0
PKP3-211ENST00000534401 UMAD1C9J7I0 102 aa15.02■□□□□ -0
PKP3-211ENST00000534401 TCL1AP56279 114 aa15.02■□□□□ -0
PKP3-211ENST00000534401 TDRG1Q3Y452 100 aa15.02■□□□□ -0
PKP3-211ENST00000534401 MBD3L1Q8WWY6 194 aa15.02■□□□□ -0
PKP3-211ENST00000534401 GSN-AS1Q9NRJ2 163 aa15.02■□□□□ -0
PKP3-211ENST00000534401 KANTRA0A1W2PQU2 76 aa15.01□□□□□ -0.01
PKP3-211ENST00000534401 TMEM88Q6PEY1 159 aa15.01□□□□□ -0.01
PKP3-211ENST00000534401 STOML3Q8TAV4 291 aa15.01□□□□□ -0.01
PKP3-211ENST00000534401 ZNF471Q9BX82 626 aaPredicted RBP15.01□□□□□ -0.01
PKP3-211ENST00000534401 NKX6-2Q9C056 277 aaPredicted RBP15.01□□□□□ -0.01
PKP3-211ENST00000534401 RPH3ALQ9UNE2 315 aa15.01□□□□□ -0.01
PKP3-211ENST00000534401 MAP1LC3B2A6NCE7 125 aa15□□□□□ -0.01
PKP3-211ENST00000534401 FBLL1A6NHQ2 334 aaKnown RBP15□□□□□ -0.01
PKP3-211ENST00000534401 FAM74A7A6NL05 159 aa15□□□□□ -0.01
PKP3-211ENST00000534401 RGS13O14921 159 aa15□□□□□ -0.01
PKP3-211ENST00000534401 SPINK4O60575 86 aa15□□□□□ -0.01
PKP3-211ENST00000534401 HTN3P15516 51 aa15□□□□□ -0.01
PKP3-211ENST00000534401 FHITP49789 147 aa15□□□□□ -0.01
PKP3-211ENST00000534401 EIF5AP63241 154 aaKnown RBP15□□□□□ -0.01
PKP3-211ENST00000534401 LGALSLQ3ZCW2 172 aaPredicted RBP15□□□□□ -0.01
PKP3-211ENST00000534401 MAP1LC3BQ9GZQ8 125 aa15□□□□□ -0.01
PKP3-211ENST00000534401 KLF12Q9Y4X4 402 aa15□□□□□ -0.01
PKP3-211ENST00000534401 C1QBP02746 253 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 FGF8P55075 233 aaPredicted RBP14.99□□□□□ -0.01
PKP3-211ENST00000534401 Q6ZTI0 123 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 CYB561D1Q8N8Q1 229 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 TMEM75Q8N9X5 138 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 ATG101Q9BSB4 218 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 TREM1Q9NP99 234 aa14.99□□□□□ -0.01
PKP3-211ENST00000534401 P0DMU3 169 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 FAM231AP0DMU4 169 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 FAM231CP0DMU5 169 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 DPPA3Q6W0C5 159 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 PSG8Q9UQ74 426 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 ARL2-SNX15V9GYD0 113 aa14.98□□□□□ -0.01
PKP3-211ENST00000534401 GAGE12BA1L429 117 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 K7EQM0 130 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 GAGE7O76087 117 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 GAGE12FP0CL80 117 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 GAGE12GP0CL81 117 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 GAGE12IP0CL82 117 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 FLI1Q01543 452 aaPredicted RBP14.97□□□□□ -0.01
PKP3-211ENST00000534401 LGALS9BQ3B8N2 356 aa14.97□□□□□ -0.01
PKP3-211ENST00000534401 TRAV21A0A0B4J279 112 aa14.96□□□□□ -0.01
PKP3-211ENST00000534401 F5H768 121 aa14.96□□□□□ -0.01
PKP3-211ENST00000534401 TPT1P13693 172 aaKnown RBP14.96□□□□□ -0.01
PKP3-211ENST00000534401 IQCF2Q8IXL9 164 aa14.96□□□□□ -0.01
PKP3-211ENST00000534401 POM121L12Q8N7R1 296 aa14.96□□□□□ -0.01
PKP3-211ENST00000534401 SGK494Q96LW2 274 aa14.96□□□□□ -0.01
PKP3-211ENST00000534401 MUC21Q5SSG8 566 aa14.95□□□□□ -0.02
PKP3-211ENST00000534401 HIST1H2BAQ96A08 127 aa14.95□□□□□ -0.02
PKP3-211ENST00000534401 NACAE9PAV3 2078 aa14.95□□□□□ -0.02
PKP3-211ENST00000534401 PFDN1O60925 122 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 HOXA5P20719 270 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 ZNF80P51504 273 aaPredicted RBP14.94□□□□□ -0.02
PKP3-211ENST00000534401 UBE2G2P60604 165 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 ZNF415Q09FC8 603 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 RNF212Q495C1 297 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 FAM159AQ6UWV7 190 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 TCEAL7Q9BRU2 100 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 NDFIP1Q9BT67 221 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 MDFICQ9P1T7 246 aa14.94□□□□□ -0.02
PKP3-211ENST00000534401 F6UZH7 168 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 H3BNG1 76 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 PEX7O00628 323 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 SAPCD1Q5SSQ6 148 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 COX8CQ7Z4L0 72 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 FAM213BQ8TBF2 198 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 LINC00479Q96M42 142 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 C8orf49Q96NF6 230 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 SPXQ9BT56 116 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 C11orf21Q9P2W6 132 aa14.93□□□□□ -0.02
PKP3-211ENST00000534401 TRGV11A0A075B6L2 103 aa14.92□□□□□ -0.02
PKP3-211ENST00000534401 SFT2D1Q8WV19 159 aa14.92□□□□□ -0.02
PKP3-211ENST00000534401 TRGV1A0A0A0MS02 117 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms