RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MUC21Q5SSG8 566 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 THAP6Q8TBB0 222 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 FLG2Q5D862 2391 aaPredicted RBP12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 OR10J4P0C629 311 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 Q5VSD8 79 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 WFDC10BQ8IUB3 73 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
SSSCA1-206ENST00000531405 TRGV4A0A0C4DH28 118 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 NBEAP1P0C6P0 100 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 ZNF138P52744 262 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 NHLH2Q02577 135 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 SLAQ13239 276 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 MDFICQ9P1T7 246 aa12.49□□□□□ -0.41
SSSCA1-206ENST00000531405 K7EQD1 137 aa12.48□□□□□ -0.41
SSSCA1-206ENST00000531405 H2AFB2P0C5Z0 115 aa12.48□□□□□ -0.41
SSSCA1-206ENST00000531405 FXYD5Q96DB9 178 aa12.48□□□□□ -0.41
SSSCA1-206ENST00000531405 MRPL32Q9BYC8 188 aaKnown RBP12.48□□□□□ -0.41
SSSCA1-206ENST00000531405 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
SSSCA1-206ENST00000531405 TRAV9-2A0A087WT02 112 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 IFNA5P01569 189 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 SRIP30626 198 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
SSSCA1-206ENST00000531405 GYPEP15421 78 aa12.46□□□□□ -0.41
SSSCA1-206ENST00000531405 FRZBQ92765 325 aa12.46□□□□□ -0.41
SSSCA1-206ENST00000531405 SMR3BP02814 79 aaPredicted RBP12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 HAMPP81172 84 aa12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 ZNF266Q14584 549 aa12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 OR10G4Q8NGN3 311 aa12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
SSSCA1-206ENST00000531405 EVI2AP22794 236 aa12.44□□□□□ -0.42
SSSCA1-206ENST00000531405 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
SSSCA1-206ENST00000531405 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
SSSCA1-206ENST00000531405 TRBV7-9A0A0J9YWB2 115 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 OR7C2O60412 319 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 SIX6O95475 246 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 CSN1S1P47710 185 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 RASL10AQ92737 203 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 OR5AC2Q9NZP5 309 aa12.43□□□□□ -0.42
SSSCA1-206ENST00000531405 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 CRYGDP07320 174 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 GCSHP23434 173 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 LRRC37A5PQ49AS3 106 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 Q6AWC8 147 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 WDR61Q9GZS3 305 aaKnown RBP12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 NAGKQ9UJ70 344 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 DNAH8Q96JB1 4490 aa12.42□□□□□ -0.42
SSSCA1-206ENST00000531405 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
SSSCA1-206ENST00000531405 ORM1P02763 201 aa12.41□□□□□ -0.42
SSSCA1-206ENST00000531405 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
SSSCA1-206ENST00000531405 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
SSSCA1-206ENST00000531405 SPXQ9BT56 116 aa12.41□□□□□ -0.42
SSSCA1-206ENST00000531405 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 C9JCJ5 164 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 DIRC3C9JPN6 131 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 K7EP13 123 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 KCNIP2Q9NS61 270 aa12.4□□□□□ -0.42
SSSCA1-206ENST00000531405 TRAV4A0A0B4J268 109 aa12.39□□□□□ -0.43
SSSCA1-206ENST00000531405 H0YIZ8 118 aa12.39□□□□□ -0.43
SSSCA1-206ENST00000531405 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
SSSCA1-206ENST00000531405 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
SSSCA1-206ENST00000531405 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
SSSCA1-206ENST00000531405 GNRH2O43555 120 aa12.38□□□□□ -0.43
SSSCA1-206ENST00000531405 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
SSSCA1-206ENST00000531405 BATF3Q9NR55 127 aa12.38□□□□□ -0.43
SSSCA1-206ENST00000531405 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
SSSCA1-206ENST00000531405 IGLV5-52A0A0A0MRZ9 124 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 NMES1Q9C002 83 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
SSSCA1-206ENST00000531405 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
SSSCA1-206ENST00000531405 M0R2P5 195 aa12.36□□□□□ -0.43
SSSCA1-206ENST00000531405 PSCAO43653 123 aa12.36□□□□□ -0.43
SSSCA1-206ENST00000531405 TDRG1Q3Y452 100 aa12.36□□□□□ -0.43
SSSCA1-206ENST00000531405 F6UZH7 168 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 TYMSP04818 313 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 PPT1P50897 306 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 KHDC3LQ587J8 217 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 MZT2BQ6NZ67 158 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 ATP5SQ99766 215 aa12.35□□□□□ -0.43
SSSCA1-206ENST00000531405 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
SSSCA1-206ENST00000531405 PGPA6NDG6 321 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms