RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 C9JCJ5 164 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 CST7O76096 145 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 BCAP31P51572 246 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 TIRAPP58753 221 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 VWC2Q2TAL6 325 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 TRBV7-9A0A0J9YWB2 115 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 NAP1L6A6NFF2 107 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 NOL3O60936 208 aaKnown RBP9.81□□□□□ -0.84
CSTF3-204ENST00000524556 ZNF138P52744 262 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 MUC21Q5SSG8 566 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 FAM122CQ6P4D5 195 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 CHAC2Q8WUX2 184 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 SPXQ9BT56 116 aa9.81□□□□□ -0.84
CSTF3-204ENST00000524556 CAV2P51636 162 aa9.8□□□□□ -0.84
CSTF3-204ENST00000524556 BAXQ07812 192 aa9.8□□□□□ -0.84
CSTF3-204ENST00000524556 Q6ZSA8 131 aa9.8□□□□□ -0.84
CSTF3-204ENST00000524556 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
CSTF3-204ENST00000524556 LSM5Q9Y4Y9 91 aaKnown RBP9.8□□□□□ -0.84
CSTF3-204ENST00000524556 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 UBE2L5PA0A1B0GUS4 154 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 FAM24AA6NFZ4 105 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 S100A5P33763 92 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 ZNF266Q14584 549 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 Q8TAT8 98 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 SLC25A31Q9H0C2 315 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 Q9HAA7 133 aa9.79□□□□□ -0.84
CSTF3-204ENST00000524556 GPN1Q9HCN4 374 aaPredicted RBP9.79□□□□□ -0.84
CSTF3-204ENST00000524556 CCSO14618 274 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 S100A11P31949 105 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 PPT1P50897 306 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 ZNF846Q147U1 533 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 TMEM183BQ1AE95 376 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 TMEM183AQ8IXX5 376 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 OR4C5Q8NGB2 326 aa9.78□□□□□ -0.84
CSTF3-204ENST00000524556 PKHD1L1Q86WI1 4243 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 TRAV8-6A0A0B4J262 113 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 NBEAP1P0C6P0 100 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 FGF7P21781 194 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 INPP1P49441 399 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 SULT1A1P50225 295 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 BAK1Q16611 211 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
CSTF3-204ENST00000524556 BTCP35070 178 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 TRIQKQ629K1 86 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 Q6AWC8 147 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 MIR17HGQ75NE6 70 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 OR51M1Q9H341 326 aa9.76□□□□□ -0.85
CSTF3-204ENST00000524556 IGSF23A1L1A6 192 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 RBAKDNA6NC62 111 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 FAM25EA8MYX2 175 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 M0R2P5 195 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 PFN1P07737 140 aaKnown RBP9.75□□□□□ -0.85
CSTF3-204ENST00000524556 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-204ENST00000524556 PVALBP20472 110 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-204ENST00000524556 HBG1P69891 147 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 HBG2P69892 147 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 WFDC2Q14508 124 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 ATP6V1FQ16864 119 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 OR10J3Q5JRS4 329 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 SPANXN2Q5MJ10 180 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 TM2D2Q9BX73 214 aa9.75□□□□□ -0.85
CSTF3-204ENST00000524556 LYRM2Q9NU23 88 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-204ENST00000524556 IGHV3-16A0A0C4DH30 117 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 CSN1S1P47710 185 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 CNPY1Q3B7I2 92 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 TDRG1Q3Y452 100 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 STX12Q86Y82 276 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 TMEM252Q8N6L7 170 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 NPCDR1Q9BY65 106 aa9.74□□□□□ -0.85
CSTF3-204ENST00000524556 C5orf51A6NDU8 294 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 CENPXA8MT69 81 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 GNRH2O43555 120 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 OXTP01178 125 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 LAGE3Q14657 143 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 PHYHIPLQ96FC7 376 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 NAGKQ9UJ70 344 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
CSTF3-204ENST00000524556 OR10J4P0C629 311 aa9.72□□□□□ -0.85
CSTF3-204ENST00000524556 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-204ENST00000524556 RANP62826 216 aaKnown RBP9.72□□□□□ -0.85
CSTF3-204ENST00000524556 LELP1Q5T871 98 aa9.72□□□□□ -0.85
CSTF3-204ENST00000524556 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms