RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR51A4Q8NGJ6 313 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 LCN9Q8WX39 176 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 BORCS8Q96FH0 119 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 SNHG12Q9BXW3 62 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 TAS2R8Q9NYW2 309 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 CHCHD2Q9Y6H1 151 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 SCN3AQ9NY46 2000 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 BAZ2BQ9UIF8 2168 aaKnown RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 KIF13AQ9H1H9 1805 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 KDM6AO15550 1401 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 ARHGAP31Q2M1Z3 1444 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 PRG4Q92954 1404 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 SCAPERQ9BY12 1400 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 SYNJ1O43426 1573 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 MYO18AQ92614 2054 aaKnown RBP1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 CUL7Q14999 1698 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 N4BP2Q86UW6 1770 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 LOC110117498A0A087WWA1 95 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 TRBV6-8A0A0A6YYG3 113 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 TCRBV4S1A1TA0A5B7 111 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 SNAPC5O75971 98 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 CXCL1P09341 107 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 LINC00694P0DN24 101 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 ARPP19P56211 112 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 HSD52Q0P140 79 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 TMEM244Q5VVB8 128 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 GLIPR1L1Q6UWM5 242 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 TMEM14EPQ6UXP3 125 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 LINC00299Q6ZSB3 139 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR10AC1Q8NH08 325 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 COPS9Q8WXC6 57 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 RPRMQ9NS64 109 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 MPC1Q9Y5U8 109 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 KTN1Q86UP2 1357 aaKnown RBP1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 TRAPPC8Q9Y2L5 1435 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 MICAL3Q7RTP6 2002 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 ADGRL2O95490 1459 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 MYOM2P54296 1465 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 CCDC141Q6ZP82 1450 aa1.81□□□□□ -2.12
HMGB1P46-201ENST00000520062 CCDC180Q9P1Z9 1646 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 TNRC6AQ8NDV7 1962 aaKnown RBP1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 IGHV1-58A0A0C4DH39 117 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 E7EUB6 86 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 GABARAPH6UMI1 98 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 H7BYZ3 331 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 CST7O76096 145 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 TNFP01375 233 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 SDC2P34741 201 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 RPL22P35268 128 aaKnown RBP1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 TPPP2P59282 170 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 MEIG1Q5JSS6 88 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 Q5XG85 94 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 HRCT1Q6UXD1 115 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 GKN2Q86XP6 184 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 SNX29P2Q8IUI4 249 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR5D16Q8NGK9 328 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 ZNF714Q96N38 554 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 MCEEQ96PE7 176 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 SNRNP25Q9BV90 132 aaKnown RBP1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 FREM1Q5H8C1 2179 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 CLIP1P30622 1438 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 BAZ1AQ9NRL2 1556 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 PIK3C2AO00443 1686 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 PPLO60437 1756 aa1.8□□□□□ -2.12
HMGB1P46-201ENST00000520062 PCDH15Q96QU1 1955 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 LOC107984640A0A0U1RRK4 108 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ZNF736B4DX44 427 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ZNF670-ZNF695F2Z2N8 137 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 H3BQF6 201 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 M0R2N4 97 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 HIST1H2BKO60814 126 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 HIST1H2BJP06899 126 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ARL14EPLP0DKL9 152 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ZNF93P35789 620 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 LSM3P62310 102 aaKnown RBP1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 QRFPP83859 136 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 PLGLB1Q02325 96 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 CCSMST1Q4G0I0 132 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 C2orf82Q6UX34 121 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ATOH7Q8N100 152 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 PLPP5Q8NEB5 264 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR5D14Q8NGL3 314 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 NAT14Q8WUY8 206 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 CARD19Q96LW7 228 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 OTORQ9NRC9 128 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 CBLN4Q9NTU7 201 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 CPSF1Q10570 1443 aaKnown RBP1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 PZPP20742 1482 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 MAP3K1Q13233 1512 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 NISCHQ9Y2I1 1504 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 NRKQ7Z2Y5 1582 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 LAMB2P55268 1798 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 PARP14Q460N5 1801 aa1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 SNRNP200O75643 2136 aaKnown RBP1.79□□□□□ -2.12
HMGB1P46-201ENST00000520062 ANK1P16157 1881 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 414.9 ms