RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
TFF3-204ENST00000518498 TRBV7-9A0A0J9YWB2 115 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 C9JCJ5 164 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 GNG4P50150 75 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 ZNF138P52744 262 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 ZNF124Q15973 351 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 VGLL1Q99990 258 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 SEC11CQ9BY50 192 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
TFF3-204ENST00000518498 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 F8W036 122 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 NANOS2P60321 138 aaKnown RBP13.2□□□□□ -0.3
TFF3-204ENST00000518498 Q86TA4 180 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 ODF3Q96PU9 254 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 NIPSNAP3BQ9BS92 247 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 AGPAT4-IT1Q9H0P7 198 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 LY96Q9Y6Y9 160 aa13.2□□□□□ -0.3
TFF3-204ENST00000518498 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 F6UB75 175 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 LTAP01374 205 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 ERCC8Q13216 396 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 TMEM241Q24JQ0 296 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 ACTL10Q5JWF8 245 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 PRNTQ86SH4 94 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 BAGE2Q86Y30 109 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 STHQ8IWL8 128 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 NAT8Q9UHE5 227 aa13.19□□□□□ -0.3
TFF3-204ENST00000518498 H3BMM0 161 aa13.18□□□□□ -0.3
TFF3-204ENST00000518498 TSPOP30536 169 aa13.18□□□□□ -0.3
TFF3-204ENST00000518498 CENPWQ5EE01 88 aa13.18□□□□□ -0.3
TFF3-204ENST00000518498 FRAS1Q86XX4 4008 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 KNCNA6PVL3 124 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 A8MTW9 85 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
TFF3-204ENST00000518498 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
TFF3-204ENST00000518498 LEPP41159 167 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 TCTAP57738 103 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 PNRC1Q12796 327 aaPredicted RBP13.17□□□□□ -0.3
TFF3-204ENST00000518498 GDF5OSQ5U4N7 250 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 TMEM183AQ8IXX5 376 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 OR4B1Q8NGF8 309 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
TFF3-204ENST00000518498 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
TFF3-204ENST00000518498 DEFB1P60022 68 aa13.16□□□□□ -0.3
TFF3-204ENST00000518498 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
TFF3-204ENST00000518498 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
TFF3-204ENST00000518498 CT45A10P0DMU9 189 aa13.15□□□□□ -0.3
TFF3-204ENST00000518498 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
TFF3-204ENST00000518498 Q8TAT8 98 aa13.15□□□□□ -0.3
TFF3-204ENST00000518498 TVP23CQ96ET8 276 aa13.15□□□□□ -0.3
TFF3-204ENST00000518498 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 DEFB4AO15263 64 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
TFF3-204ENST00000518498 AMBPP02760 352 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
TFF3-204ENST00000518498 CRISP2P16562 243 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 ADCYAP1P18509 176 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 COX8CQ7Z4L0 72 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 TRPT1Q86TN4 253 aaKnown RBP13.14□□□□□ -0.31
TFF3-204ENST00000518498 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 MLST8Q9BVC4 326 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
TFF3-204ENST00000518498 KMT2AQ03164 3969 aa13.13□□□□□ -0.31
TFF3-204ENST00000518498 IGLL5B9A064 214 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 IGKV3-20P01619 116 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 MGST1P10620 155 aaKnown RBP13.12□□□□□ -0.31
TFF3-204ENST00000518498 S100A1P23297 94 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 CDKN1BP46527 198 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 MORN3Q6PF18 240 aaPredicted RBP13.12□□□□□ -0.31
TFF3-204ENST00000518498 AMTNQ6UX39 209 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
TFF3-204ENST00000518498 GCGP01275 180 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 GPX1P07203 203 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 RPL23P62829 140 aaKnown RBP13.11□□□□□ -0.31
TFF3-204ENST00000518498 ADIRFQ15847 76 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 SVBPQ8N300 66 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 APLNQ9ULZ1 77 aa13.11□□□□□ -0.31
TFF3-204ENST00000518498 KLLNB2CW77 178 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 B4DEV8 164 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 ATP6V1G1O75348 118 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 APOC3P02656 99 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 NHLRC2Q8NBF2 726 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
TFF3-204ENST00000518498 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
TFF3-204ENST00000518498 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms