RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 HLA-DRB4P13762 266 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 RNF151Q2KHN1 245 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 ZNF491Q8N8L2 437 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 HIGD1BQ9P298 99 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 GNG7O60262 68 aa14.2□□□□□ -0.14
SDC2-202ENST00000518385 C21orf62Q9NYP8 219 aa14.2□□□□□ -0.14
SDC2-202ENST00000518385 SIGLEC8Q9NYZ4 499 aa14.2□□□□□ -0.14
SDC2-202ENST00000518385 MOB4Q9Y3A3 225 aa14.2□□□□□ -0.14
SDC2-202ENST00000518385 CR1P17927 2039 aa14.2□□□□□ -0.14
SDC2-202ENST00000518385 PRRC2AP48634 2157 aaKnown RBP14.19□□□□□ -0.14
SDC2-202ENST00000518385 J3QLI3 93 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 K7EP34 96 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 TGFAP01135 160 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 SMIM17P0DL12 118 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 WFDC11Q8NEX6 87 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 SMPXQ9UHP9 88 aa14.19□□□□□ -0.14
SDC2-202ENST00000518385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.18□□□□□ -0.142e-7■■□□□ 11.4
SDC2-202ENST00000518385 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 RPL7P18124 248 aaKnown RBP14.18□□□□□ -0.14
SDC2-202ENST00000518385 ZNF138P52744 262 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 C5orf56Q8N8D9 126 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 IFI27L1Q96BM0 104 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 UNC79Q9P2D8 2635 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 PDZD2O15018 2839 aa14.18□□□□□ -0.14
SDC2-202ENST00000518385 A0A096LNJ9 63 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 TRAV40A0A0B4J280 105 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 IFI27P40305 119 aaPredicted RBP14.17□□□□□ -0.14
SDC2-202ENST00000518385 CRIP2P52943 208 aaPredicted RBP14.17□□□□□ -0.14
SDC2-202ENST00000518385 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
SDC2-202ENST00000518385 ATP6V0BQ99437 205 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 D6R8Y8 96 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 H3BTX0 84 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 AVPP01185 164 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 CRIP1P50238 77 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 LYZL1Q6UWQ5 148 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 CNFNQ9BYD5 112 aa14.17□□□□□ -0.14
SDC2-202ENST00000518385 MAP1AP78559 2803 aaPredicted RBP14.16□□□□□ -0.14
SDC2-202ENST00000518385 RAB9AP51151 201 aa14.16□□□□□ -0.14
SDC2-202ENST00000518385 CSTL1Q9H114 145 aa14.16□□□□□ -0.14
SDC2-202ENST00000518385 NXT2Q9NPJ8 142 aaKnown RBP14.16□□□□□ -0.14
SDC2-202ENST00000518385 IGHV3OR16-10A0A075B7F0 116 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 SH2D1AO60880 128 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 IGHV4-38-2P0DP08 117 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 MRPL51Q4U2R6 128 aaKnown RBP14.15□□□□□ -0.14
SDC2-202ENST00000518385 FER1L6-AS1Q8NA97 138 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 OR8A1Q8NGG7 326 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 MAP1LC3AQ9H492 121 aa14.15□□□□□ -0.14
SDC2-202ENST00000518385 H0Y8G0 127 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 ATP6V0E1O15342 81 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 IL4P05112 153 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 IGLC6P0CF74 106 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 ADAMTSL5Q6ZMM2 481 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 OR2K2Q8NGT1 345 aa14.14□□□□□ -0.15
SDC2-202ENST00000518385 F8W735 103 aaPredicted RBP14.13□□□□□ -0.15
SDC2-202ENST00000518385 ATP5LO75964 103 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 NCR2O95944 276 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 CKS2P33552 79 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 BRD3OSQ6XYD6 125 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 ITPR2Q14571 2701 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 A0A0G2JLM5 398 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 BRI3O95415 125 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 CACNG7P62955 275 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 KIR3DS1Q14943 382 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
SDC2-202ENST00000518385 HECTD1Q9ULT8 2610 aa14.12□□□□□ -0.15
SDC2-202ENST00000518385 A6NDX4 124 aa14.12□□□□□ -0.15
SDC2-202ENST00000518385 ECSCRQ19T08 205 aa14.12□□□□□ -0.15
SDC2-202ENST00000518385 ZNF502Q8TBZ5 544 aa14.12□□□□□ -0.15
SDC2-202ENST00000518385 PRR25Q96S07 402 aa14.12□□□□□ -0.15
SDC2-202ENST00000518385 TRBV7-1A0A0A6YYK4 115 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 G3V4G9 280 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 CTSGP08311 255 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 FCER1GP30273 86 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 NEGR1Q7Z3B1 354 aa14.11□□□□□ -0.15
SDC2-202ENST00000518385 IGF1P05019 195 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 FABP2P12104 132 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 TAL2Q16559 108 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 C19orf54Q5BKX5 351 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 AMN1Q8IY45 258 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 EEF1AKMT3Q96AZ1 226 aa14.1□□□□□ -0.15
SDC2-202ENST00000518385 TRAV41A0A0B4J266 112 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 A0A1W2PPM0 123 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 PRSS47A8MTI9 375 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 H3BUA1 57 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 SMIM13P0DJ93 91 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 EVI2AP22794 236 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 C15orf32Q32M92 178 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 C17orf77Q96MU5 243 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 TP73-AS1Q9UF72 201 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 FAM223BA6NKX1 122 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 FSHBP01225 129 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 FAM223AQ8IWN6 122 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 C8orf49Q96NF6 230 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 TPPP3Q9BW30 176 aa14.09□□□□□ -0.15
SDC2-202ENST00000518385 TIMM8BQ9Y5J9 83 aaPredicted RBP14.09□□□□□ -0.15
SDC2-202ENST00000518385 CCDC168Q8NDH2 2452 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 ABCA1O95477 2261 aa14.08□□□□□ -0.16
SDC2-202ENST00000518385 TMEM213A2RRL7 107 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms